MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-093O11
Chromosome	8 (Build37)
Map Location	127,430,671 - 127,490,197
singlet/doublet	doublet
Overlap gene	Egln1
Upstream gene	Nup133, Abcb10, Taf5l, AK122209, LOC100042530, LOC100042535, Galnt2, Pgbd5, Cog2, Agt, Capn9, 2310022B05Rik, Ttc13, Arv1, 2310031A18Rik, LOC668444, Trim67, 2810004N23Rik, Gnpat, Exoc8, Gm505
Downstream gene	Tsnax, Disc1, Sipa1l2, 4933403G14Rik, 2310079N02Rik, E330039K12Rik, BC021891
Link	Open Mouse BAC browser

Click to get alignment info.

name	Nup133 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234865 MGI:2442620
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abcb10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56199 MGI:1860508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Taf5l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102162 MGI:1919039
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AK122209 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382038 MGI:2681124
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042530 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042530
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100042535 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042535
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Galnt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108148 MGI:894694
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pgbd5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209966 MGI:2429955
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cog2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76332 MGI:1923582
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Agt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11606 MGI:87963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Capn9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73647 MGI:1920897
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310022B05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69551 MGI:1916801
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttc13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234875 MGI:2384573
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arv1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68865 MGI:1916115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310031A18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69627 MGI:1916877
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668444 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668444
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Trim67 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330863 MGI:3045323
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 12 Proteins

name	2810004N23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66523 MGI:1913773
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gnpat (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14712 MGI:1343460
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Exoc8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102058 MGI:2142527
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm505 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244666 MGI:2685351
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 4 Proteins

name	Egln1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:112405 MGI:1932286
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tsnax (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53424 MGI:1855672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Disc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244667 MGI:2447658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Sipa1l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244668 MGI:2676970
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933403G14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74393 MGI:1921643
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310079N02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66566 MGI:1913816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E330039K12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270109 MGI:2445010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC021891 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234878 MGI:2385307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nup133 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:26986606 GeneID:234865 MGI:2442620
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleoporin 133 transcript_id : NM_172288.1

name	Abcb10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66932950 GeneID:56199 MGI:1860508
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family B (MDR/TAP), member 10 transcript_id : NM_019552.2

name	Taf5l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129904 GeneID:102162 MGI:1919039
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor transcript_id : NM_133966.2

name	AK122209 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71274161 GeneID:382038 MGI:2681124
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence AK122209 transcript_id : NM_001029876.1

name	LOC100042535 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259070 GeneID:100042535
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to reproductive homeobox on X chromosome 8 transcript_id : XM_001478390.1

name	Galnt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46877108 GeneID:108148 MGI:894694
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 transcript_id : NM_139272.2

name	Pgbd5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67782366 GeneID:209966 MGI:2429955
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : piggyBac transposable element derived 5 transcript_id : NM_171824.2

name	Cog2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475693 GeneID:76332 MGI:1923582
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : component of oligomeric golgi complex 2 transcript_id : NM_029746.2

name	Agt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113461997 GeneID:11606 MGI:87963
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : angiotensinogen (serpin peptidase inhibitor, clade A, member 8) transcript_id : NM_007428.3

name	Capn9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352341 GeneID:73647 MGI:1920897
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calpain 9 (nCL-4) transcript_id : NM_023709.3

name	2310022B05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42475991 GeneID:69551 MGI:1916801
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310022B05 gene transcript_id : NM_175149.3

name	Ttc13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352053 GeneID:234875 MGI:2384573
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 13 transcript_id : NM_145607.3

name	Arv1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802810 GeneID:68865 MGI:1916115
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ARV1 homolog (yeast) transcript_id : NM_026855.2

name	2310031A18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487446 GeneID:69627 MGI:1916877
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310031A18 gene transcript_id : NM_001081120.1

name	Trim67 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259116 GeneID:330863 MGI:3045323
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 2 Proteins product : tripartite motif-containing 67, transcript variant 1 transcript_id : XM_001480431.1

name	Trim67 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259118 GeneID:330863 MGI:3045323
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 10 Proteins product : tripartite motif-containing 67, transcript variant 2 transcript_id : XM_001480436.1

name	Trim67 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259120 GeneID:330863 MGI:3045323
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 9 Proteins product : tripartite motif-containing 67, transcript variant 3 transcript_id : XM_001480440.1

name	2810004N23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385069 GeneID:66523 MGI:1913773
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810004N23 gene transcript_id : NM_025615.1

name	Gnpat (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981733 GeneID:14712 MGI:1343460
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glyceronephosphate O-acyltransferase transcript_id : NM_010322.2

name	Exoc8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111160870 GeneID:102058 MGI:2142527
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : exocyst complex component 8 transcript_id : NM_198103.2

name	Gm505 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259122 GeneID:244666 MGI:2685351
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 4 Proteins product : gene model 505, (NCBI) transcript_id : XM_001480455.1

name	Egln1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956235 GeneID:112405 MGI:1932286
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : EGL nine homolog 1 (C. elegans) transcript_id : NM_053207.1

name	Tsnax (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130833 GeneID:53424 MGI:1855672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translin-associated factor X transcript_id : NM_016909.2

name	Disc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119874420 GeneID:244667 MGI:2447658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : disrupted in schizophrenia 1 transcript_id : NM_174854.2

name	Disc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119874422 GeneID:244667 MGI:2447658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : disrupted in schizophrenia 1 transcript_id : NM_174853.2

name	Sipa1l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487492 GeneID:244668 MGI:2676970
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal-induced proliferation-associated 1 like 2 transcript_id : NM_001081337.1

name	4933403G14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801814 GeneID:74393 MGI:1921643
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933403G14 gene transcript_id : NM_028908.2

name	2310079N02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380891 GeneID:66566 MGI:1913816
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310079N02 gene transcript_id : NM_025636.2

name	E330039K12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126352571 GeneID:270109 MGI:2445010
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E330039K12 gene transcript_id : NM_175561.3

name	BC021891 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119637820 GeneID:234878 MGI:2385307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC021891 transcript_id : NM_145608.2

name	Nup133 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26986607 CCDS:CCDS22765.1 GeneID:234865 MGI:2442620
definition	GO_component : GO:0005643 - nuclear pore [Evidence IEA] [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005487 - nucleocytoplasmic transporter activity [Evidence ISS]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006406 - mRNA export from nucleus [Evidence ISS]; GO:0015031 - protein transport [Evidence IEA]; GO:0050658 - RNA transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : nucleoporin 133 protein_id : NP_758492.1

name	Abcb10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506367 CCDS:CCDS22766.1 GeneID:56199 MGI:1860508
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence ISS] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : Abc-mitochondrial erythroid; ATP-binding cassette, sub-family B (MDR/TAP), member 12 product : ATP-binding cassette, sub-family B, member 10 protein_id : NP_062425.1

name	Taf5l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527184 CCDS:CCDS22767.1 GeneID:102162 MGI:1919039
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor protein_id : NP_598727.1

name	AK122209 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71274162 CCDS:CCDS22768.1 GeneID:382038 MGI:2681124
definition	codon_start : 1 product : hypothetical protein LOC382038 protein_id : NP_001025047.1

name	LOC100042535 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259071 GeneID:100042535
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478440.1

name	Galnt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46877109 CCDS:CCDS22769.1 GeneID:108148 MGI:894694
definition	GO_component : GO:0005796 - Golgi lumen [Evidence TAS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004653 - polypeptide N-acetylgalactosaminyltransferase activity [Evidence ISS] [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006493 - protein amino acid O-linked glycosylation [Evidence ISS] codon_start : 1 note : ppGaNTase-T2 product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 protein_id : NP_644678.2

name	Pgbd5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:25777750 CCDS:CCDS22770.1 GeneID:209966 MGI:2429955
definition	codon_start : 1 product : piggyBac transposable element derived 5 protein_id : NP_741958.1

name	Cog2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17921980 CCDS:CCDS22771.1 GeneID:76332 MGI:1923582
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007030 - Golgi organization and biogenesis [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : low density lipoprotein receptor defect C complementing product : component of oligomeric golgi complex 2 protein_id : NP_084022.1

name	Agt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113461998 GeneID:11606 MGI:87963
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA]; GO:0031702 - type 1 angiotensin receptor binding [Evidence IDA]; GO:0031703 - type 2 angiotensin receptor binding [Evidence IPI] GO_process : GO:0002019 - angiotensin mediated regulation of renal output [Evidence IMP]; GO:0001998 - angiotensin mediated vasoconstriction during regulation of blood pressure [Evidence IDA]; GO:0048143 - astrocyte activation [Evidence IMP]; GO:0001568 - blood vessel development [Evidence IMP]; GO:0002035 - brain renin-angiotensin system [Evidence IDA]; GO:0007160 - cell-matrix adhesion [Evidence IMP]; GO:0042756 - drinking behavior [Evidence IMP]; GO:0008065 - establishment of blood-nerve barrier [Evidence IMP]; GO:0030198 - extracellular matrix organization and biogenesis [Evidence IMP]; GO:0042445 - hormone metabolism [Evidence IMP]; GO:0001822 - kidney development [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0043524 - negative regulation of neuron apoptosis [Evidence IMP]; GO:0001543 - ovarian follicle rupture [Evidence IMP]; GO:0030432 - peristalsis [Evidence IMP]; GO:0040018 - positive regulation of body size [Evidence IMP]; GO:0045723 - positive regulation of fatty acid biosynthesis [Evidence IMP]; GO:0043410 - positive regulation of MAPKKK cascade [Evidence IMP]; GO:0046622 - positive regulation of organ size [Evidence IMP] [Evidence IDA]; GO:0001991 - regulation of blood pressure by circulatory renin-angiotensin [Evidence IMP]; GO:0050880 - regulation of blood vessel size [Evidence IEA]; GO:0001999 - renal response to blood flow during renin-angiotensin regulation of blood pressure [Evidence IMP]; GO:0002018 - renin-angiotensin regulation of aldosterone production [Evidence IMP]; GO:0009409 - response to cold [Evidence IMP]; GO:0051145 - smooth muscle cell differentiation [Evidence IMP] [Evidence IDA]; GO:0048659 - smooth muscle cell proliferation [Evidence IMP] [Evidence IDA]; GO:0001658 - ureteric bud branching [Evidence IMP] [Evidence IDA]; GO:0042310 - vasoconstriction [Evidence IEA] codon_start : 1 product : angiotensinogen protein_id : NP_031454.3

name	Capn9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18201861 GeneID:73647 MGI:1920897
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0004198 - calpain activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : calpain 9 (nCL-4) protein_id : NP_076198.1

name	2310022B05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42475992 CCDS:CCDS22773.1 GeneID:69551 MGI:1916801
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC69551 protein_id : NP_780358.2

name	Ttc13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249339 GeneID:234875 MGI:2384573
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : tetratricopeptide repeat domain 13 protein_id : NP_663582.2

name	Arv1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312118 CCDS:CCDS22774.1 GeneID:68865 MGI:1916115
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006629 - lipid metabolism [Evidence IEA]; GO:0006665 - sphingolipid metabolism [Evidence IEA] codon_start : 1 product : ARV1 homolog protein_id : NP_081131.1

name	2310031A18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487447 GeneID:69627 MGI:1916877
definition	codon_start : 1 product : hypothetical protein LOC69627 protein_id : NP_001074589.1

name	Trim67 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259117 GeneID:330863 MGI:3045323
definition	codon_start : 1 product : tripartite motif-containing 67 isoform 1 protein_id : XP_001480481.1

name	Trim67 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259119 GeneID:330863 MGI:3045323
definition	codon_start : 1 product : tripartite motif-containing 67 isoform 2 protein_id : XP_001480486.1

name	Trim67 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259121 GeneID:330863 MGI:3045323
definition	codon_start : 1 product : tripartite motif-containing 67 isoform 3 protein_id : XP_001480490.1

name	2810004N23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385070 CCDS:CCDS22775.1 GeneID:66523 MGI:1913773
definition	codon_start : 1 exception : mismatches in translation note : Ayu21-55Imeg; Gt(Ayu21)55Imeg product : hypothetical protein LOC66523 protein_id : NP_079891.1

name	Gnpat (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981734 CCDS:CCDS22776.1 GeneID:14712 MGI:1343460
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005782 - peroxisomal matrix [Evidence TAS]; GO:0005778 - peroxisomal membrane [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IDA]; GO:0016287 - glycerone-phosphate O-acyltransferase activity [Evidence IMP] [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0044255 - cellular lipid metabolism [Evidence IEA]; GO:0008611 - ether lipid biosynthesis [Evidence TAS] [Evidence IMP]; GO:0016044 - membrane organization and biogenesis [Evidence IMP]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : glyceronephosphate O-acyltransferase protein_id : NP_034452.2

name	Exoc8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37674218 CCDS:CCDS22777.1 GeneID:102058 MGI:2142527
definition	GO_component : GO:0000145 - exocyst [Evidence ISS] GO_function : GO:0035091 - phosphoinositide binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS]; GO:0017160 - Ral GTPase binding [Evidence ISS] GO_process : GO:0006887 - exocytosis [Evidence IEA] [Evidence ISS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : exocyst complex component 8 protein_id : NP_932771.1

name	Gm505 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259123 GeneID:244666 MGI:2685351
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480505.1

name	Egln1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956236 GeneID:112405 MGI:1932286
definition	GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0031418 - L-ascorbic acid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016706 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Evidence IEA]; GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0019538 - protein metabolism [Evidence IEA] codon_start : 1 product : EGL nine homolog 1 protein_id : NP_444437.1

name	Tsnax (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8394490 CCDS:CCDS22778.1 GeneID:53424 MGI:1855672
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : translin-associated factor X protein_id : NP_058605.1

name	Disc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119874421 GeneID:244667 MGI:2447658
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : disrupted in schizophrenia 1 isoform 1 protein_id : NP_777279.2

name	Disc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119874423 GeneID:244667 MGI:2447658
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : disrupted in schizophrenia 1 isoform 2 protein_id : NP_777278.2

name	Sipa1l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487493 GeneID:244668 MGI:2676970
definition	GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : signal-induced proliferation-associated 1 like 2 protein_id : NP_001074806.1

name	4933403G14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859726 CCDS:CCDS22780.1 GeneID:74393 MGI:1921643
definition	codon_start : 1 product : hypothetical protein LOC74393 protein_id : NP_083184.1

name	2310079N02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385098 CCDS:CCDS22781.1 GeneID:66566 MGI:1913816
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC66566 protein_id : NP_079912.1

name	E330039K12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126352572 GeneID:270109 MGI:2445010
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; pecanex-like 2 product : pecanex-like 2 isoform 2 protein_id : NP_780770.2

name	BC021891 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119637821 GeneID:234878 MGI:2385307
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : mixed lineage kinase 4 product : cDNA sequence BC021891 protein_id : NP_663583.2

name	LOC100042530 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042530
definition	number : 1 pseudo : _no_value

name	LOC668444 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668444
definition	number : 1 pseudo : _no_value

name	LOC668444 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668444
definition	number : 2 pseudo : _no_value

clone name	MSMg01-542B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512H20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-214C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336K19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-347C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478B22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-376P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396C04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-279K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182D14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-093O11.T7 (MSMg01no093_o11.b1)	MSMg01-093O11.TJ (MSMg01no093_o11.g1)
ACC	AG311221	AG311222
length	1,159	1,291
length of high quality (start - end)	137 (22 - 158)	281 (116 - 396)
definition	CHROMAT_FILE: MSMg01no093_o11.b1 PHD_FILE: MSMg01no093_o11.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:49:12 2005	CHROMAT_FILE: MSMg01no093_o11.g1 PHD_FILE: MSMg01no093_o11.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:49:13 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(127,430,671 - 127,430,807)	(127,489,917 - 127,490,197)
sequence	CTCTAAAAGACCGATCCCCTGCTTACCACGTGTATGTTTGCGCAGAGTCC GCTGTCTCCTTGTTAAATCTCTTCCCAGAACTGGAAAGTGTAGGGCAGTT TCTCTACATACTGGAGAAGCCATCTTTATCATTACTGCTTGTCTAAGGCA ACCTAAGCCTGGAGCCCAGATATGTGTGCTTTGCTTGCTTTCTAGCCCTC TCCGCTCCAGAAAGGGTTATTTTTCTCCTTCTCTAAGTTTCCGTTCTTCC TTGCACATCTGCATTTGTTATAAGTTTTTGAGTCATGTTCTTTTTTTTTC TGCCATAGCACGACTATCTAGCTTTTTTTATTATTTGCCCCCTTTTTTTT TCCCCCCCCCCCTTTTGTTTTTTTTCTTTCAACCAAAAAACTGTGGTTTT TTTTTTTTTTTTTTTATTTTCTTTTTTCCTTTCTTTCCTTCTTTCCTTTC TATTTTCTTATTTCTTGTTTTCTTTCTCTTTTTTTTATTTCTTTTATTTT TTCCTTTCTTTTTTCTTTTTTTTTTACCCTCTCTTTTCTTTTTTCCTCTT TTTTTTTTCTCTTTCTTTTCTTTTTTTTTTTTTTTTTTTTCCATTCTTTT TATTATCTCTTTTTCCTTTTTTTCATCTTCTTTTCTTTTTTTTTTTTTCC TTTCTTTTCCTTTCTTTCTCCTCACATTTTTCTTTTCTTCATTTCTTTTT TTTTTTTCATTTTCATTTTTTTTTACCCTTTCTTTTCTTTCTTTACCTCT ATTTATTCTTCTTTTCTTTTTTTTCCTTCTTATTTTTTTCTCTCTTCTTT CTTTTTCTCTTATCCCTCGATTTTCTATTTTTTTCTTCCATCATTTTTTC TTCTTACTTTCTTCTCTTATTTCTTTTTTTTTATACCTTCTTTTTTTTTC TTTTGTCCTTCTTTCTCTTTTTCTTCATATATCTTTTATTCTTTTTTTTT TCTCTTTACTTTCTTTTTTTTTTTTTTTTCTTCTCTTCTCTTTTCTTATT TCACATCTTTCCTCTTCCTTTTTCTTTTTTGTTTGTATTTTTATTCTTTT TCATTTTCTTTCTCTCTTTTTTTTTGTCTTCTATTACTTCTTTCTCTACT TATTATCTATTTTTCTTCTCTCCCTTTTTCCTCATTTTCTTCTTCTTCTT CTTTATTTT	NTTTCCAGCTAGGAGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXCCTTTTTCTCCTACATTGTGCAGTTTATAGACA GATAAGATGCTTGACTGATCCACATCCTGATGCAGCCTTGAACTGAGCCA GTCCAGCAGCGCGGGACCTGTTGGTGAAGGACCCAAGCTGCTAAGCTTTG TCTCTAGTCAGGAAGTTGATGAAGAAGGTGGCCATCTTGGAAATCCTCCC TGTTTATTACATAGCCATGGCTTCCTCCCCATCTGTCTACCTACCAGCGG GTCTAACCTGGTCTCTCACTTCAATGCTAAGATAAAAGATTTTTATTGAA GCCACTGCCTAACTAACTCAACCCGCCACCACACCATCTTCAGGAGTTTT TTTTTATCTTCACTGAATGTCCCAGTTAATACAGTTGTCTCTAAGATCCC GTTTTTTTCACCCCCCCCCGTCTCAGCTCTTTCGTTTTAAATAAAAATGT TTTCTGTTGTGCACACTATGTCCATTCATTATAATTTCCCTCATGATCAT TCTTGTTATTTTTTTTTATTTCTTTTACTTCTCATTATTCTCTTTCTTTT TTCTTGTTTCTTTTCTTTTTCTTCTCCTATTTTTTTTTTTTTTTTTTTTT TTTTTTCTTCTTTTTTTTTCTATCTTTTTTTTTTCTTTTTCCTTTTTTTC TTTCTTTTTTTTCTTTTTTTTTTCTTTTTTTCTTTTTTTTTCTCTTTTTT TTCTTTCCTTTTTTTTTTTTCTTTCTTTTTTTCTTTCTTTTTTTTTTTTT ACTTTTTTTTTTTTTTCTTCCTTCTCTTTCTTTTTTTTTCTTTTTATTAT TCTTTTATTTCTCTTTTATTTTTTCCCTTTTTTTTTTTCTTTTTTTTTTT TTTTTTTTTTTTTTCTTTATTTTCTTTCTTCTTTTTTTTTTTTTTTTCTT TCTTCTTTTTTTATTTCCTTTTCTTTTCTTCTTTATATTTTGTTTTCTTT TATTTTTCTTTCTTTTCTTTTTTTCTCTTCTTTCTTCTTTTTTTATATTT CTTTCTTCTTCTCTTTTTTCTCTTTTTTTCTTCTATCTCTTTTTTTTTTT ATTTCTTTTTTTTATCTTTTTTTACTTTACTCCTTTTTATTTATTTCTTT CTCATTTCTTTTTTTTACTTTTTCTCTTTCTATTCTTATTATATGTATTC TCTCTTTTTTTTTCTTTCTTATCATTTTCTATTATTCTCTGACTTCACTC TTCTTTACATTTACTTTATTCNTTATCCCTTCTCTTTTATT
quality values	Open. Hide. 9 9 9 9 10 9 8 8 8 8 8 10 15 17 18 12 12 8 9 9 9 17 22 37 33 33 33 33 28 24 30 32 29 29 29 29 29 42 37 36 34 34 42 39 39 39 43 39 39 39 30 28 28 37 37 43 43 43 48 43 43 48 48 50 59 59 59 59 34 27 14 9 9 9 12 11 11 22 25 39 41 39 39 36 37 39 37 33 33 31 31 31 37 28 28 28 32 43 59 59 57 57 57 57 42 39 35 39 35 43 33 40 32 28 20 20 19 28 28 32 39 39 48 48 44 47 43 44 40 46 26 23 12 11 11 24 26 42 48 57 46 39 39 42 42 32 32 26 26 26 36 33 42 42 34 30 14 14 18 26 13 14 15 21 11 11 11 18 22 32 30 21 16 10 10 19 19 39 41 37 30 24 15 15 15 30 24 35 39 42 48 43 27 18 11 9 9 12 12 19 11 10 8 13 8 8 8 8 8 8 10 21 21 20 12 9 9 11 11 11 21 22 34 25 23 28 23 25 18 24 15 14 14 13 15 13 19 19 23 23 19 19 9 10 10 21 21 14 21 14 10 10 10 10 10 11 12 12 21 16 12 11 11 11 10 11 19 16 14 16 12 10 11 11 11 17 11 11 11 16 15 12 12 11 11 11 12 16 9 13 10 10 12 23 23 24 13 12 9 9 14 10 10 11 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 9 18 17 12 8 8 9 9 9 9 11 11 12 11 9 6 8 8 8 10 10 9 10 10 19 21 23 15 14 14 14 15 19 21 19 15 14 13 10 11 10 13 11 8 8 8 8 12 13 18 23 13 15 10 10 10 10 11 10 9 9 8 8 8 8 19 15 8 8 6 6 6 6 8 8 8 8 8 8 8 12 12 16 11 11 10 9 8 8 8 8 8 8 9 10 16 16 11 12 12 21 16 11 11 6 7 6 6 10 8 12 8 13 10 10 8 8 10 10 8 8 9 9 9 9 8 8 12 10 9 10 8 10 6 6 8 8 8 8 10 11 15 15 9 9 9 13 13 10 12 10 10 8 8 8 6 6 13 10 10 10 10 10 11 11 9 9 10 9 9 9 10 10 10 10 12 10 8 8 6 6 8 8 10 8 9 10 11 19 16 10 10 9 9 10 10 10 10 17 12 12 12 9 9 9 8 8 8 7 6 8 8 8 8 6 6 8 8 10 10 8 6 6 6 6 8 10 10 10 9 9 9 13 12 12 6 6 8 8 8 8 9 17 19 19 11 8 8 8 8 10 10 18 15 10 9 9 9 9 9 13 14 14 12 10 10 10 12 7 9 7 8 8 10 10 10 15 14 11 11 11 8 8 8 8 8 8 9 15 13 11 6 6 6 6 8 10 10 8 10 8 8 8 8 10 8 8 6 6 10 13 9 10 10 13 15 20 17 15 8 8 8 8 8 10 8 8 8 10 10 10 12 15 17 8 6 6 6 6 8 11 11 11 10 10 10 8 10 6 6 6 6 8 8 8 8 8 8 8 8 9 9 9 10 10 11 8 8 8 6 10 8 9 9 12 13 12 11 14 11 10 17 11 11 9 9 9 9 8 8 8 8 8 8 9 18 20 18 25 13 10 6 6 6 10 6 9 9 9 9 11 18 19 15 9 7 10 8 8 8 8 8 6 6 8 8 8 8 8 6 8 6 6 8 8 11 8 9 9 9 8 8 8 8 8 8 10 8 10 8 8 6 6 6 8 8 8 8 6 6 8 8 11 11 8 8 8 8 8 8 10 6 6 8 8 8 9 10 11 11 16 12 10 6 6 8 8 9 10 11 12 12 10 10 8 6 6 6 8 8 8 6 6 8 8 8 8 10 10 14 10 10 9 6 8 8 7 9 9 9 9 9 9 9 9 12 10 8 8 8 8 8 8 8 8 8 10 9 10 19 10 10 10 8 8 8 6 6 10 10 8 8 10 10 10 10 9 9 13 9 9 9 9 9 12 12 11 10 9 10 8 8 8 8 10 10 9 9 8 10 10 8 8 6 8 8 8 8 10 8 8 10 14 11 8 9 9 8 8 11 10 8 10 8 6 6 8 8 9 9 9 9 9 9 10 12 11 9 10 13 12 11 11 14 12 11 11 11 11 8 8 6 6 8 8 9 9 9 10 10 9 9 10 10 14 26 24 19 17 16 15 15 10 8 6 8 6 6 8 8 12 10 10 10 10 10 9 10 10 11 12 19 10 10 6 6 8 6 8 8 7 7 8 8 7 7 8 8 11 11 10 8 8 7 6 10 10 13 10 10 6 6 8 12 12 12 15 9 9 9 18 9 9 9 11 9 8 8 12 10 10 10 8 10 13 17 15 13 8 8 8 9 11 10 10 16 8 8 7 7 8 8 11 23 15 15 15 11 10 8 8 8 8 8 8 12 8 8 8 8 6 6 6 6 6 8 8 8 8 10 9 9 9 8 8 8 8 8 8 8 8 6 6 8 10 9 9 11 10 8 10 10 8 12 7 7 8 8 8 8 8 8 8 10 10 12 8 8 8 8 6 7 8 10 15 12 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 6 6 8 10 10 7	Open. Hide. 0 3 7 6 0 0 0 6 6 6 7 6 6 6 6 6 6 9 9 15 12 14 17 15 8 8 8 8 8 10 10 19 19 19 17 12 12 14 28 25 33 31 31 31 33 31 36 36 36 36 36 38 38 38 38 50 53 53 50 50 50 50 47 43 27 20 9 9 12 12 12 15 13 19 21 24 25 27 29 31 31 33 36 36 36 36 38 38 38 53 42 42 38 53 53 53 53 53 53 50 44 39 37 37 25 25 9 11 11 11 11 11 12 9 15 15 26 24 34 34 39 27 22 12 12 15 26 26 33 36 43 50 50 48 57 48 47 48 48 48 48 54 54 57 57 57 68 68 68 57 68 68 68 68 68 57 68 68 59 59 59 47 47 43 44 57 57 57 57 50 50 50 50 68 68 68 68 44 44 20 24 24 24 13 15 15 41 41 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 59 68 59 59 57 59 43 43 43 52 52 59 57 54 57 57 57 57 57 57 57 52 52 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 57 57 57 43 43 27 21 18 12 26 26 32 24 35 37 57 57 57 57 57 57 57 54 54 54 57 57 59 57 68 57 57 57 57 57 43 43 24 18 11 11 11 27 27 52 50 57 50 48 48 50 57 43 43 43 57 57 57 57 57 57 57 57 57 43 28 34 15 19 21 19 19 11 12 13 34 32 35 32 30 42 42 57 57 57 68 68 41 41 15 12 11 15 18 23 31 28 30 39 36 36 23 31 23 31 41 41 28 17 17 17 27 25 35 30 30 34 28 25 28 33 24 28 23 23 20 32 32 37 28 37 37 37 37 41 34 25 16 11 10 11 8 9 10 11 13 15 15 15 17 25 19 11 9 9 11 11 24 28 39 24 24 11 11 12 18 18 23 28 28 20 12 11 11 11 21 21 35 39 41 40 40 41 34 23 18 11 9 9 12 8 8 10 8 8 8 9 17 12 14 11 11 11 11 10 10 10 10 15 10 12 12 9 17 18 12 12 9 9 9 9 15 15 23 13 8 8 8 8 11 15 15 11 9 9 9 12 12 11 10 10 8 10 15 32 37 28 24 15 15 8 8 12 11 11 10 8 8 6 7 10 8 10 10 10 10 11 11 11 11 11 12 12 9 8 8 6 6 8 8 8 8 8 8 8 9 9 9 9 9 9 9 8 8 8 8 8 9 8 11 8 9 12 10 11 10 12 10 10 6 6 8 12 10 11 10 8 10 8 8 8 8 8 8 8 6 6 8 6 6 8 8 8 8 10 8 11 13 8 8 9 8 11 11 8 8 8 8 9 8 8 10 6 6 8 8 6 6 8 12 8 8 6 7 10 8 8 8 8 7 7 7 9 12 12 10 10 10 11 11 13 10 10 9 12 13 14 10 12 19 20 14 14 15 13 9 9 8 8 8 8 8 8 8 10 18 24 16 18 18 24 17 15 8 6 6 8 8 8 10 10 10 10 13 13 17 12 11 11 17 19 24 19 19 15 15 10 10 10 17 12 12 14 13 13 10 10 10 14 19 21 14 10 8 6 6 6 9 12 19 15 10 10 10 8 8 6 6 8 8 10 10 8 8 8 8 12 8 9 9 9 8 8 8 8 8 8 9 9 10 10 8 8 8 8 11 8 10 10 11 14 11 19 15 22 24 18 22 16 17 17 13 15 11 10 9 9 10 8 11 8 9 10 12 12 10 10 10 10 15 13 19 15 25 27 17 20 10 10 10 18 15 6 8 8 8 11 12 11 11 11 12 13 12 10 10 9 9 9 8 8 8 8 8 15 8 8 6 6 8 10 12 13 15 12 10 10 10 9 8 8 10 10 8 11 10 8 8 8 8 8 8 8 10 10 12 10 12 8 8 8 11 18 12 8 8 8 8 8 8 8 8 10 8 10 8 10 8 8 8 8 9 9 8 8 10 10 13 15 11 16 22 17 10 10 9 9 9 8 8 11 11 11 12 19 21 24 28 17 13 9 9 10 10 10 11 12 13 10 17 8 8 8 8 8 8 6 6 10 10 9 9 12 12 21 18 14 13 11 13 10 11 14 13 12 12 12 15 11 8 9 8 8 8 8 8 8 8 8 8 15 17 17 17 11 9 8 8 6 6 6 6 8 10 9 9 9 9 8 8 8 8 8 8 11 17 8 10 7 9 8 11 10 9 9 9 10 10 15 13 12 10 8 8 8 8 13 15 13 9 9 9 10 10 7 7 8 8 8 9 9 12 13 14 13 13 9 9 9 9 8 8 8 8 11 11 10 10 6 8 8 8 12 16 10 10 10 10 8 8 8 9 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 11 13 10 10 8 6 8 6 6 10 8 11 10 10 10 10 10 10 10 8 8 8 8 8 8 8 10 17 20 15 15 11 11 9 9 9 9 8 7 7 7 7 8 8 15 13 8 8 8 8 8 8 11 11 10 9 10 10 8 8 8 8 8 8 8 8 8 8 9 9 9 6 6 6 6 8 10 9 9 9 9 10 9 9 8 8 6 8 6 8 8 10 10 10 8 10 16 13 18 16 12 8 6 6 8 8 12 8 8 7 6 8 8 8 8 8 8 8 8 8 9 10 10 8 8 8 8 8 8 8 8 6 8 8 8 8 8 8 8 8 8 8 10 14 12 15 10 8 8 8 6 10 6 6 8 8 8 10 8 9 9 10 10 8 13 8 8 8 9 8 8 9 8 8 8 7 8 8 6 7 6 7 10 10 9 8 8 8 18 19 17 10 8 8 6 6 8 8 9 9 9 8 8 8 8 8 3 0 3 9 10 11 8 8 8 8 8 8 10 9 9 10 10 8 8 8 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no093_o11.b1 MSMg01no093_o11.b1 CHROMAT_FILE:
MSMg01no093_o11.b1 PHD_FILE: MSMg01no093_o11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:12 2005
         (137 letters)



>mm_chr8_127430471_127431007
          Length = 537

 Score =  242 bits (125), Expect = 7e-69
 Identities = 134/137 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttaccacgtgtatgtttgcgcagagtccgctgtctccttgttaaatctcttcccagaac 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 201 cttaccacgtgtatgtttgcgcagagtccgctgtctccttgttaaatctctaaccagaac 260

                                                                       
Query: 61  tggaaagtgtagggcagtttctctacatactggagaagccatctttatcattactgcttg 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggaaggtgtagggcagtttctctacatactggagaagccatctttatcattactgcttg 320

                            
Query: 121 tctaaggcaacctaagc 137
           |||||||||||||||||
Sbjct: 321 tctaaggcaacctaagc 337


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 137
Length of database: 537
Length adjustment: 8
Effective length of query: 129
Effective length of database: 529
Effective search space:    68241
Effective search space used:    68241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no093_o11.g1 MSMg01no093_o11.g1 CHROMAT_FILE:
MSMg01no093_o11.g1 PHD_FILE: MSMg01no093_o11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:13 2005
         (281 letters)



>mm_chr8_127489717_127490397
          Length = 681

 Score =  489 bits (253), Expect = e-143
 Identities = 274/281 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgatccacatcctgatgcagccttgaactgagccagtccagcagcgcgggacctgttggt 60
           |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 481 tgatccacgtcctgatgcagccttgaactgagccagtccagcagcgggggacctgttggt 422

                                                                       
Query: 61  gaaggacccaagctgctaagctttgtctctagtcaggaagttgatgaagaaggtggccat 120
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaaggacacaagctgctaagctttgtctctagtcaggaagttgatgaagaaggtggccat 362

                                                                       
Query: 121 cttggaaatcctccctgtttattacatagccatggcttcctccccatctgtctacctacc 180
           ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 361 cttggaaattctccctgtttattacatagccatggcttctttcccatctgtctacctacc 302

                                                                       
Query: 181 agcgggtctaacctggtctctcacttcaatgctaagataaaagatttttattgaagccac 240
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agggggtctaacctggtctctcacttcaatgctaagataaaagatttttattgaagccac 242

                                                    
Query: 241 tgcctaactaactcaacccgccaccacaccatcttcaggag 281
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcctaactaactcaacccgccaccacaccatcttcaggag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space:   182784
Effective search space used:   182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information