CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGCGGAATT
CCACAGATATTACCAAAGCATTAACACTAAACAGTACAAACATTATCAAA
AAAGAAGAAATATTCCTTTGCATTTATTTCTTTTAATATTTTGTTCTGAT
TTGTTCTTTTATCTGCCTTTAATTGTAAGGCTATTTATTTTAAGTTGTCT
TTATATAGGTGGAGTCTATGTAGGTAGATGTCTATTTTTAGTGTTTGCTA
GCCCTTTCTACTCATGCCTATTGTCTGTATTCACTAGTTTCTGATTTTCT
ATTTAAGTTAATCTACTTGATATTTTAAAAACTTGCTAATTAGATTAATG
TAGCATCTCACTAAAATAAACATACAGGAGGAGAAACAATTGATTAATTT
CTCTGCAAGATTCTTTACTATTATCCATAGTATCTGTTAAGTTCCCAGTA
CTTAAAATATGTTATAGGTCAAATGATGGTCTTGTAATGACAATCCATTA
CCTAGTTTTTATGTGAAAAAGCATTTCATTCGTTTTTATTAGTAAAGTGT
AAATAAGAAGATAACCCTTTGCTGCATGAGTTAGATCAATTGGATCAAAC
AGGTTCTCCAACGGACAGCCATCCTAACGTCAAAGCAAATGGAGATGAGA
ACACAGAGTTGCCAGAGAGAGAAGAAATGAGACTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACTTGAAAAAATGT
TCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATT
CCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCA
GATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGG
GAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAG
AAAACTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCA
TATATCCAGAAGATGCCCCAACAGGTAAGAAGGACACATGCTCCACTATG
TTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCTAGATG
CCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGG
AGTACTACTCAGCTATTAAATAGAATGAATTTATGAAATTCCTAGCCAAA
TGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAG
AAACTCACACAATATGTATTCACTGATAAGTGGATATTAGCCCCAATCCT
AGGATACCCAAGATATAAGATATAATTTGCTAAACACATGAAACTCAGG

Query= MSMg01no094_i05.b1 MSMg01no094_i05.b1 CHROMAT_FILE:
MSMg01no094_i05.b1 PHD_FILE: MSMg01no094_i05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:12 2005
         (596 letters)



>mm_chr8_52878035_52879028
          Length = 994

 Score = 1035 bits (535), Expect = 0.0
 Identities = 577/591 (97%), Gaps = 2/591 (0%)
 Strand = Plus / Minus

                                                                       
Query: 6   ggaattccacagatattaccaaagcattaacactaaacagtacaaacattatcaaaaaag 65
           ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 794 ggaattccacagatattaccaaagcattaacact-gacagtacaaacattatcaaaaaag 736

                                                                       
Query: 66  aagaaatattcctttgcatttatttcttttaatattttgttctgatttgttcttttatct 125
           |||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 735 aagaaatattcctttgtatttattccttttaatattttgttctgattcgttcttttatct 676

                                                                       
Query: 126 gcctttaattgtaaggctatttattttaagttgtctttatataggtggagtctatgtagg 185
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 675 gcctttaattgtaaggctatttattttaagttgtcttcatataggtggagtctatgtagg 616

                                                                       
Query: 186 tagatgtctatttttagtgtttgctagccctttctactcatgcctattgtctgtattcac 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tagatgtctatttttagtgtttgctagccctttctactcatgcctattgtctgtattcac 556

                                                                       
Query: 246 tagtttctgattttctatttaagttaatctacttgatattttaaaaacttgctaattaga 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tagtttctgattttctatttaagttaatctacttgatattttaaaaacttgctaattaga 496

                                                                       
Query: 306 ttaatgtagcatctcactaaaataaacatacaggaggagaaacaattgattaatttctct 365
           ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 495 ttaatgtagcatctcacaaaaataaa-atacaggaggagaaacaattgattaatttctct 437

                                                                       
Query: 366 gcaagattctttactattatccatagtatctgttaagttcccagtacttaaaatatgtta 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gcaagattctttactattatccatagtatctgttaagttcccagtacttaaaatatgtta 377

                                                                       
Query: 426 taggtcaaatgatggtcttgtaatgacaatccattacctagtttttatgtgaaaaagcat 485
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 376 taggtcaaatgatgatcttgtaatgacaatccattacctagtttttatgtgaaagggcat 317

                                                                       
Query: 486 ttcattcgtttttattagtaaagtgtaaataagaagataaccctttgctgcatgagttag 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ttcattcgtttttattagtaaagtgtaaataagaagataaccctttgctgcatgagttag 257

                                                              
Query: 546 atcaattggatcaaacaggttctccaacggacagccatcctaacgtcaaag 596
           |||||||||||||||||||||||||||| || ||||||||||| |||||||
Sbjct: 256 atcaattggatcaaacaggttctccaacagaaagccatcctaaagtcaaag 206


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 994
Length adjustment: 10
Effective length of query: 586
Effective length of database: 984
Effective search space:   576624
Effective search space used:   576624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)