Query= MSMg01no095_m04.b1 MSMg01no095_m04.b1 CHROMAT_FILE:
MSMg01no095_m04.b1 PHD_FILE: MSMg01no095_m04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:53 2005
(606 letters)
>mm_chr8_83446368_83447374
Length = 1007
Score = 967 bits (500), Expect = 0.0
Identities = 503/504 (99%), Gaps = 1/504 (0%)
Strand = Plus / Minus
Query: 104 ttgagactcatggttttggtttggttcggtttggcttggttttcggttttgtttttttgt 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 ttgagactcatggttttggtttggttcggtttggcttggttttcggttttgtttttttgt 948
Query: 164 ttttcgagacagggtttctctgtatagccctgaatgtcctggaactcactttgtagacca 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 ttttcgagacagggtttctctgtatagccctgaatgtcctggaactcactttgtagacca 888
Query: 224 ggctggccttgaactcagaaatccgactgcctctgcctcccaagtgttgggactaaaggc 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 ggctggccttgaactcagaaatccgactgcctctgcctcccaagtgttgggactaaaggc 828
Query: 284 gtgtgccaccactgcccagcaagacttaagggttttgaaagtgcttttaaccatacaact 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 gtgtgccaccactgcccagcaagacttaagggttttgaaagtgcttttaaccatacaact 768
Query: 344 aaaggttaattctgtagtacgtttgatgtttgagc-tttttttttcattttaatctcaag 402
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 767 aaaggttaattctgtagtacgtttgatgtttgagcttttttttttcattttaatctcaag 708
Query: 403 tgacatacaactaagaaacatatacaaaccatgactgctgcatagtaatacataacgttt 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 tgacatacaactaagaaacatatacaaaccatgactgctgcatagtaatacataacgttt 648
Query: 463 tagagattgggacacagaatatttttagcttggaaccttttgggggaaatacccgcaatg 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tagagattgggacacagaatatttttagcttggaaccttttgggggaaatacccgcaatg 588
Query: 523 tgatgaatttcttgctccaagatgccccgattaatgaacagaaactgcctgaagagaccg 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 tgatgaatttcttgctccaagatgccccgattaatgaacagaaactgcctgaagagaccg 528
Query: 583 ggaaccacatcatgtctggcaaga 606
||||||||||||||||||||||||
Sbjct: 527 ggaaccacatcatgtctggcaaga 504
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1007
Length adjustment: 10
Effective length of query: 596
Effective length of database: 997
Effective search space: 594212
Effective search space used: 594212
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_m04.g1 MSMg01no095_m04.g1 CHROMAT_FILE:
MSMg01no095_m04.g1 PHD_FILE: MSMg01no095_m04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:53 2005
(360 letters)
>mm_chr8_83335970_83336729
Length = 760
Score = 688 bits (356), Expect = 0.0
Identities = 359/360 (99%)
Strand = Plus / Plus
Query: 1 cctatgtagaccaggctggcctcaaactcagagatctgcttgcctctgcctcctaagtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctatgtagaccaggctggcctcaaactcagagatctgcttgcctctgcctcctaagtgc 260
Query: 61 tgggattaaaggcgtgcaccaccacatcaagcttctagctctgttcctgaggagcagggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggattaaaggcgtgcaccaccacatcaagcttctagctctgttcctgaggagcagggt 320
Query: 121 gttctcaggtgaatcagggcaagtattcccaataaaagcccaacactgttctcagcggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttctcaggtgaatcagggcaagtattcccaataaaagcccaacactgttctcagcggga 380
Query: 181 tctcaaagggagcctggctaaggcagagccaactcagcatttcatcagtgagtgagctac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctcaaagggagcctggctaaggcagagccaactcagcatttcatcagtgagtgagctac 440
Query: 241 tgcgagatacccgctcagacactgttgacttatattgtatccctctgtcatttcaagaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcgagatacccgctcagacactgttgacttatattgtatccctctgtcatttcaagaaa 500
Query: 301 ccttaaaattttaacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagagag 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 ccttaaaattttaacgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgagagagagagagag 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 760
Length adjustment: 9
Effective length of query: 351
Effective length of database: 751
Effective search space: 263601
Effective search space used: 263601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
