Query= MSMg01no102_m13.b1 MSMg01no102_m13.b1 CHROMAT_FILE:
MSMg01no102_m13.b1 PHD_FILE: MSMg01no102_m13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:29 2005
(277 letters)
>mm_chr8_39676129_39676806
Length = 678
Score = 507 bits (262), Expect = e-148
Identities = 271/274 (98%), Gaps = 1/274 (0%)
Strand = Plus / Minus
Query: 5 gaattcctcctgata-ccaggaagggtttgtccctagttactgcagacctttttggttgt 63
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gaattcctcctgagagacaggaagggtttgtccctagttactgcagacctttttggttgt 419
Query: 64 agggtgtgagatggtattagctgctgatctgggcccagtagagaagcagaccagaagaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 agggtgtgagatggtattagctgctgatctgggcccagtagagaagcagaccagaagaaa 359
Query: 124 gatggagcttagcagtgctgtaggttccacagaaactatgtgtgtatcccatctggcatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gatggagcttagcagtgctgtaggttccacagaaactatgtgtgtatcccatctggcatg 299
Query: 184 ggtatttgagcgacaagtatggaatgtggtagggtatcgcgtcatcctcttcacttgtaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ggtatttgagcgacaagtatggaatgtggtagggtatcgcgtcatcctcttcacttgtaa 239
Query: 244 tagtagtgttaactgggtctataacaaatcagct 277
||||||||||||||||||||||||||||||||||
Sbjct: 238 tagtagtgttaactgggtctataacaaatcagct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 678
Length adjustment: 9
Effective length of query: 268
Effective length of database: 669
Effective search space: 179292
Effective search space used: 179292
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no102_m13.g1 MSMg01no102_m13.g1 CHROMAT_FILE:
MSMg01no102_m13.g1 PHD_FILE: MSMg01no102_m13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:29 2005
(355 letters)
>mm_chr8_39569248_39570002
Length = 755
Score = 687 bits (355), Expect = 0.0
Identities = 355/355 (100%)
Strand = Plus / Plus
Query: 1 aaatttcttttctgtagagccctttaggattaaaataaggggctaggaaaattaatataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatttcttttctgtagagccctttaggattaaaataaggggctaggaaaattaatataa 260
Query: 61 tgcataaacaatctaaactatggtgtgccaatgagtgtgacagcacataatatccagtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcataaacaatctaaactatggtgtgccaatgagtgtgacagcacataatatccagtac 320
Query: 121 attcaccactcaggaatgtgattgcttctttgattgcttatattgtccatcttctggtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attcaccactcaggaatgtgattgcttctttgattgcttatattgtccatcttctggtag 380
Query: 181 ggtaattttccagagcatttaaaaaaggttacatacataatcatttcttacaaggaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtaattttccagagcatttaaaaaaggttacatacataatcatttcttacaaggaaaaa 440
Query: 241 ctgttaaattaacaagaacgctacaatactgcttcaaaacaactcagaaaaacactactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgttaaattaacaagaacgctacaatactgcttcaaaacaactcagaaaaacactactg 500
Query: 301 acaaatcacttggtaataatttatgttttattacaatgaaattatttatctgggt 355
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaaatcacttggtaataatttatgttttattacaatgaaattatttatctgggt 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 755
Length adjustment: 9
Effective length of query: 346
Effective length of database: 746
Effective search space: 258116
Effective search space used: 258116
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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