Query= MSMg01no103_g21.b1 MSMg01no103_g21.b1 CHROMAT_FILE:
MSMg01no103_g21.b1 PHD_FILE: MSMg01no103_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:21 2005
(594 letters)
>mm_chr8_116412516_116413509
Length = 994
Score = 930 bits (481), Expect = 0.0
Identities = 556/601 (92%), Gaps = 35/601 (5%)
Strand = Plus / Plus
Query: 2 aaaatgtatgggtcttgaagatcttgtatgtaaaattatgagtgaaatgttagaaagaaa 61
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aaaatg-atgggtcttgaagatcttgtatgtaaaattatgagtgaaatgttagaaagaaa 253
Query: 62 atactacatcccagtttgc--------ttttttttttcatatgggttagcagtgtaaggt 113
| | ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 254 acattacatcccagtttgcttttttttttttttttttcatatgggttagcagtgtaaggt 313
Query: 114 gctcagaaacactggtaaaatctgaagaactgaattgaaaagttgagcatccatatctga 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gctcagaaacactggtaaaatctgaagaactgaattgaaaagttgagcatccatatctga 373
Query: 174 ggactgcagtggctgctgtaggtaggacagaatgacagagaagagagagctggatataga 233
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 374 ggactgcagtggctgctgtaggtagggcagaatgacagagaagagagagctgggtataga 433
Query: 234 gggagtttcaaagatcaacacatggtcctacttagtggagttttagtcatgcatacatgc 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gggagtttcaaagatcaacacatggtcctacttagtggagttttagtcatgcatacatgc 493
Query: 294 atgtaaggaaactatctcagataagagtgagacccatttgaaaggttcaaaaagaatgct 353
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 atgtaaggaaactatcccagataagagtgagacccatttgaaaggttcaaaaagaatgct 553
Query: 354 atctggttcagactgggccagagaaagcttcctttcccaccaggtataattcatacttta 413
||||||||| || ||| ||||||||| ||||||||||
Sbjct: 554 atctggttc--------cc----------------ccc--caggtataactcatacttta 587
Query: 414 tagggtgtctggtaactcatccagagtactcttgccgccatggtagggaataagtaaccc 473
|||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 588 tagggtgtctggtaactcgtccagagtactcttgccgccatggtagggaataattaaccc 647
Query: 474 tagactgagaactgccccagacctgcccaagaaatcatataaacaaagacacccagagtg 533
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 tagactgagacctgccccagacctgcccaagaaatcatataaacaaagacacccagagtg 707
Query: 534 cttaaaacgttcccaaattacttctctatagtgtagaaaaatcctaaccatacttgtagg 593
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 cttaaaatgttcccaaattacttctctatagtgtagaaaaatcctaaccatacttgtagg 767
Query: 594 a 594
|
Sbjct: 768 a 768
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space: 574656
Effective search space used: 574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no103_g21.g1 MSMg01no103_g21.g1 CHROMAT_FILE:
MSMg01no103_g21.g1 PHD_FILE: MSMg01no103_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:21 2005
(457 letters)
>mm_chr8_116467153_116468007
Length = 855
Score = 841 bits (435), Expect = 0.0
Identities = 451/457 (98%), Gaps = 2/457 (0%)
Strand = Plus / Minus
Query: 1 cacttaaatgatcaaccatatgacctcgggtgagacatctcctttctgaccatggaccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 cacttaaatgatcaaccatatgacctcgggtgagacatctcctttctgaccatggaccac 596
Query: 61 acgggtgctacactggtgcactaggactggtgatcatggccctggtggatttgataatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 acgggtgctacactggtgcactaggactggtgatcatggccctggtggatttgataatgt 536
Query: 121 ctcctagcaaccgaagcttgtttgtggatgggaaatagaaaaacaagttggagggctcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ctcctagcaaccgaagcttgtttgtggatgggaaatagaaaaacaagttggagggctcac 476
Query: 181 aaaaatatgttctacgaaaaacattccacactgtttttttggaaaacaacagacattcac 240
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 475 aaaaatatgttctacgaaaaacattccaca--gtttttttggaaaacaacagacattcac 418
Query: 241 ctcaagatatctgatgtttcacatctctttcgaacacttattaaagataaataatgcatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ctcaagatatctgatgtttcacatctctttcgaacacttattaaagataaataatgcatg 358
Query: 301 ctattcttttggctctctttttaggaattaagacttttatttccttcactattgcctgat 360
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 357 ctattcttttggctctctttttaggaattaagacttttatttccttcaatattgcctgct 298
Query: 361 tttcttactattttctaaagctacatcacgtgcaacaatttgacttggactcattttctg 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tttcttactattttctaaagttacatcacgtgcaacaatttgacttggactcattttctg 238
Query: 421 catgttggttgttttgagaacaatatatgtatattag 457
|||||||| ||||||||||||||||||||||||||||
Sbjct: 237 catgttggctgttttgagaacaatatatgtatattag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 855
Length adjustment: 10
Effective length of query: 447
Effective length of database: 845
Effective search space: 377715
Effective search space used: 377715
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
