Query= MSMg01no106_p15.b1 MSMg01no106_p15.b1 CHROMAT_FILE:
MSMg01no106_p15.b1 PHD_FILE: MSMg01no106_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:10 2005
(637 letters)
>mm_chr8_115560578_115561614
Length = 1037
Score = 1201 bits (621), Expect = 0.0
Identities = 633/637 (99%)
Strand = Plus / Minus
Query: 1 taggagggaattaagcatattcaagttagattaatgaaatactgattcgaatcaagcata 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 taggatggaattaagcatattcaagttagattaatgaaatactgattcgaatcaagcata 778
Query: 61 tcttacaatattgagaatttcttcatattgacttcctttccttaaaattcatgttcctta 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 777 tcttacaatattgagaatttcttcatattgacttccttcccttaaaattcatgttcctta 718
Query: 121 ttccttgtgtttaatgtgattattttacagaaaatactcagatagcatgttatagaacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ttccttgtgtttaatgtgattattttacagaaaatactcagatagcatgttatagaacta 658
Query: 181 cacatgtggctgccttctatccgtagcaatattttgaaattatgttttcattttccatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 cacatgtggctgccttctatccgtagcaatattttgaaattatgttttcattttccatca 598
Query: 241 actcatttttcggagagaaaaatgtgtatattgccatcattataacactgcaggttttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 actcatttttcggagagaaaaatgtgtatattgccatcattataacactgcaggttttga 538
Query: 301 aacactattgagagtgaagtgctggccttgacaaaaataaatgtttctaacaaatgacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 aacactattgagagtgaagtgctggccttgacaaaaataaatgtttctaacaaatgacat 478
Query: 361 actttgaattttcctttcaactgaatttgtatttttattttacattttttattctcacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 actttgaattttcctttcaactgaatttgtatttttattttacattttttattctcacat 418
Query: 421 gatgttatgaaatagatacaccgagtagttatactgaattcagcctgccaataaactaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gatgttatgaaatagatacaccgagtagttatactgaattcagcctgccaataaactaaa 358
Query: 481 tgaaatttttaggcgcttcaactagaaacatcatccaagttaaaaagcaaacacctttgc 540
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tgaaaattttaggcgcttcatctagaaacatcatccaagttaaaaagcaaacacctttgc 298
Query: 541 tggtggcatcattgaacaaatggctgacagcagcagatcagcattattgatttcatttga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tggtggcatcattgaacaaatggctgacagcagcagatcagcattattgatttcatttga 238
Query: 601 caagcacaaaattggcccatctctgagagaagtattt 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 caagcacaaaattggcccatctctgagagaagtattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no106_p15.g1 MSMg01no106_p15.g1 CHROMAT_FILE:
MSMg01no106_p15.g1 PHD_FILE: MSMg01no106_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:10 2005
(557 letters)
>mm_chr8_115415903_115416860
Length = 958
Score = 1044 bits (540), Expect = 0.0
Identities = 552/556 (99%), Gaps = 1/556 (0%)
Strand = Plus / Plus
Query: 1 tacattttcaacaggaacaaattaattttttaattgagctctgaaatgacctgttcttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacattttcaacaggaacaaattaattttttaattgagctctgaaatgacctgttcttcc 260
Query: 61 caaatgcatattaaaagaagatgattacaaatggctgtcaggattgaatgagactttgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaatgcatattaaaagaagatgattacaaatggctgtcaggattgaatgagactttgta 320
Query: 121 ataacttttttcatttgctgagcagatttggccaacttttcctagtagaaatttatggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataacttttttcatttgctgagcagatttggccaacttttcctagtagaaatttatggca 380
Query: 181 cttgatgaataattggaaagtaacatcttctggaaaaaa-gattgtggttatgtgaaaga 239
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 cttgatgaataattggaaagtaacatcttctggaaaaaaagattgtggttatgtgaaaga 440
Query: 240 aaatgagacagagataacgtaaaagcattttgtttcaaaaaaattccagataaaaggcca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatgagacagagataacgtaaaagcattttgtttcaaaaaaattccagataaaaggcca 500
Query: 300 aacaaaaacccttgcaagttaggcgtagtttcactaggaaatattgccacccatgttgat 359
|||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 501 aacaaaaacccttgcaagttaggcgtagtttcactaggaaatattggtaaccatgttgat 560
Query: 360 atttttccatgcttacttattgagatttatttatttattttggtttttcgagacagggtt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atttttccatgcttacttattgagatttatttatttattttggtttttcgagacagggtt 620
Query: 420 tctctgtatagccctggctgtcctggaactcactctgtagaccaggctggcctcgaactc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctctgtatagccctggctgtcctggaactcactctgtagaccaggctggcctcgaactc 680
Query: 480 agaaatccaccggtctctgcctcccaagtgctgggattaaaggcgttttacagtttaatt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaaatccaccggtctctgcctcccaagtgctgggattaaaggcgttttacagtttaatt 740
Query: 540 aggtatgtgtgtgtag 555
||||||||||||||||
Sbjct: 741 aggtatgtgtgtgtag 756
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 958
Length adjustment: 10
Effective length of query: 547
Effective length of database: 948
Effective search space: 518556
Effective search space used: 518556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
