Query= MSMg01no108_b08.b1 MSMg01no108_b08.b1 CHROMAT_FILE:
MSMg01no108_b08.b1 PHD_FILE: MSMg01no108_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:48 2005
(307 letters)
>mm_chr8_63729548_63730254
Length = 707
Score = 571 bits (295), Expect = e-167
Identities = 304/307 (99%)
Strand = Plus / Plus
Query: 1 agaaatcggttgtaattaattgcatgtgcagatgctgatgctgagatggggagggaatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaatcggttgtaattaattgcatgtgcagatgctgatgctgagatggggagggaatta 260
Query: 61 gtctaattatgtttaaagtacagtttgcatgcctaaataggtaatcacaccgcaggcctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtctaattatgtttaaagtacagtttgcatgcctaaataggtaatcacaccgcaggcctg 320
Query: 121 cctatccttgtccactttctcctttaggcatgtagtaaattttttggccattaagcatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctatccttgtccactttctcctttaggcatgtagtaaattttttggccattaagcatga 380
Query: 181 cctcttcagagtctgtggagcagggcaaagtgacggcactcatatgccagggctgcacgc 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 cctcttcagagtctgtggagcagggcaaagtgacggcactcagatgccagggctgcacgc 440
Query: 241 actcctggggaagtttgatactcagtggcagcatccgtacaagattctcgatggaacctt 300
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 441 actcctggggaagtttgatacttagtggcagcatccgtagaagattctcgatggaacctt 500
Query: 301 tagtaga 307
|||||||
Sbjct: 501 tagtaga 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 707
Length adjustment: 9
Effective length of query: 298
Effective length of database: 698
Effective search space: 208004
Effective search space used: 208004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_b08.g1 MSMg01no108_b08.g1 CHROMAT_FILE:
MSMg01no108_b08.g1 PHD_FILE: MSMg01no108_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:48 2005
(338 letters)
>mm_chr8_63900774_63901512
Length = 739
Score = 632 bits (327), Expect = 0.0
Identities = 336/339 (99%), Gaps = 1/339 (0%)
Strand = Plus / Minus
Query: 1 catccctttaagacctaggggaggtaaggaagggctcagatgataagccctcc-aaatat 59
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 539 catccctttaagacctaggggaggtaaggaagggctcagatgataagccctccaaaatat 480
Query: 60 acctaccctccactgtcttcctctgggcaagtgaatgcatcttcggagggttcaaagcag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 acctaccctccactgtcttcctctgggcaagtgaatgcatcttcggagggttcaaagcag 420
Query: 120 tccctgtgggactactgctgtgagaaaatagctcataccaaatccagcaaccatctcctc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tccctgtgggactactgctgtgagaaaatagctcataccaaatccagcaaccatctcctc 360
Query: 180 tttccttcacaggcctctgttgacaatgtcgctcagacacatgctaacagtaatcttcca 239
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 359 tttccttcacaggcctctgttgacagtgtcgctcagacacatgctaacagtaatcttcca 300
Query: 240 gtaacatctggttttcacactgaatttccaatggaaacagaaggttgtacccagggaacg 299
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gtaacatctggttttcaccctgaatttccaatggaaacagaaggttgtacccagggaacg 240
Query: 300 cacgtgatccttaaatgtctactaggagacaatctgggg 338
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 cacgtgatccttaaatgtctactaggagacaatctgggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 739
Length adjustment: 9
Effective length of query: 329
Effective length of database: 730
Effective search space: 240170
Effective search space used: 240170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
