Query= MSMg01no109_l01.b1 MSMg01no109_l01.b1 CHROMAT_FILE:
MSMg01no109_l01.b1 PHD_FILE: MSMg01no109_l01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:00 2005
(162 letters)
>mm_chr8_17080531_17081086
Length = 556
Score = 267 bits (138), Expect = 2e-76
Identities = 156/162 (96%), Gaps = 6/162 (3%)
Strand = Plus / Minus
Query: 1 gatttggagacttttttattatttttgatttttgaaagcgtatgtatattggggttacct 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 356 gatttggagacttttttattatttttgatttttgaaagcgtatgtatatt-gggttacct 298
Query: 61 gggttttcatttcaatttattcaatagttgttattgtgctggcaagtgaaacaaattttt 120
|||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 297 -ggttttcatttcaatttattcaat-gttgtta-tgtgctggcaagtgaaacaaattttt 241
Query: 121 atgatagataataacaggcaccctntaaaagcagagcataaa 162
||||||||||||||||||||||| |||||||||||||||||
Sbjct: 240 -tgatagataataacaggcaccct-taaaagcagagcataaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 162
Length of database: 556
Length adjustment: 8
Effective length of query: 154
Effective length of database: 548
Effective search space: 84392
Effective search space used: 84392
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no109_l01.g1 MSMg01no109_l01.g1 CHROMAT_FILE:
MSMg01no109_l01.g1 PHD_FILE: MSMg01no109_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:00 2005
(149 letters)
>mm_chr8_17041352_17041900
Length = 549
Score = 250 bits (129), Expect = 4e-71
Identities = 141/145 (97%)
Strand = Plus / Plus
Query: 1 ttaagacatacccatattaaagtctggtttcaatttcaattacttgttttagcaataagg 60
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 201 ttaagacatacccatattaaagtctggtttcaatttcaattacttggtttagtaataagg 260
Query: 61 agtgaaggcaagttagttttgcattactaatgatgagacttatgcccataaatacagact 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 agtgaaggcaagttagttttgcattactaatgatgagacttaggcccataaatacagact 320
Query: 121 ttgataatagctctaaatacagatg 145
||||||| |||||||||||||||||
Sbjct: 321 ttgataagagctctaaatacagatg 345
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 149
Length of database: 549
Length adjustment: 8
Effective length of query: 141
Effective length of database: 541
Effective search space: 76281
Effective search space used: 76281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
