Query= MSMg01no110_p06.b1 MSMg01no110_p06.b1 CHROMAT_FILE:
MSMg01no110_p06.b1 PHD_FILE: MSMg01no110_p06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:42 2005
(637 letters)
>mm_chr8_52334814_52335850
Length = 1037
Score = 1185 bits (613), Expect = 0.0
Identities = 628/633 (99%)
Strand = Plus / Minus
Query: 5 gaattctattacaactgggaaaatatctacctagttcactttaaagacgtaacaagagct 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 837 gaattctattacaagtgggaaaatatctacctagttcactttaaagacgtaacaagggct 778
Query: 65 ctcccaaggataaaaaggagaatttcatctactctacattatgtggctttcttcctattt 124
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 777 ctcccaaggataaaaaggagaatttcatctattctacattatgtggctttcttcctattt 718
Query: 125 ggtctctagttatgaggtgttgaaaagtgcatcttctgataaagctgccatctgcagggt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ggtctctagttatgaggtgttgaaaagtgcatcttctgataaagctgccatctgcagggt 658
Query: 185 tccttagactaaccactaacaaatgcaaactgacacttctgaaatggattagtgtgcata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tccttagactaaccactaacaaatgcaaactgacacttctgaaatggattagtgtgcata 598
Query: 245 tcaacaatcttctaatggctttcatcctttctatcacatttgaccttgccttttggaggc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tcaacaatcttctaatggctttcatcctttctatcacatttgaccttgccttttggaggc 538
Query: 305 atttgataaatgattaattattcattctagaacttgatccttcaacaactaaactacttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 atttgataaatgattaattattcattctagaacttgatccttcaacaactaaactacttc 478
Query: 365 ccggaaacaaatatggatgtgtattagagcatcagaataaatcaattattcattgatcct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ccggaaacaaatatggatgtgtattagagcatcagaataaatcaattattcattgatcct 418
Query: 425 ttgccttgtatttgcctagtgtgtgtcaatctctaagttaggcggactgtgaggaaaaaa 484
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 417 ttgccttgtatttgcctagtgtgtgtcaatctctaagttaggcagactgtgaggaaaaaa 358
Query: 485 gaaaaaggaatacatgctctctgaccaattttatttccagaatgaaacagatactaacag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gaaaaaggaatacatgctctctgaccaattttatttccagaatgaaacagatactaacag 298
Query: 545 aaggcttgggctgagttattatgattagctacttttttgtgtctatcctcagtaatttcc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aaggcttgggctgagttattatgattagctacttttttgtgtctatcctcagtaatttcc 238
Query: 605 attcaacctgtgaatgtgtgttcttgatgaaga 637
|||||||||||||||||||||||||| ||||||
Sbjct: 237 attcaacctgtgaatgtgtgttcttggtgaaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no110_p06.g1 MSMg01no110_p06.g1 CHROMAT_FILE:
MSMg01no110_p06.g1 PHD_FILE: MSMg01no110_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:42 2005
(281 letters)
>mm_chr8_52240635_52241315
Length = 681
Score = 499 bits (258), Expect = e-146
Identities = 280/296 (94%), Gaps = 15/296 (5%)
Strand = Plus / Plus
Query: 1 atcaggaaaaagaccccagctagaccagtatagagttgtagtcttccacattacatgacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcaggaaaaagaccccagctagaccagtatagagttgtagtcttccacattacatgacc 260
Query: 61 tgactggaaaggaaaatgtggagcatgcaagagaagagcctctctatgtcatttcacagt 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgactggaaaggaaaatgtagagcatgcaagagaagagcctctctatgtcatttcacagt 320
Query: 121 tggcacattaaaaactaatggaagaagaagcagaagtagaagtagaagcaaaagatgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggcacattaaaaactaatggaagaagaagcagaagtagaagtagaagcaaaagatgaag 380
Query: 181 aggaagaggaagaagagaa-aa--------------agaagaagaagaagaagaagaaga 225
||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 381 aggaagaggaagaagagaagaagaagaagaagaagaagaagaagaagaagaagaagaaga 440
Query: 226 agaagaagaagaagaagaagaagaagaaggaggaggaggaggaggaggaggaggag 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaagaagaagaagaagaagaagaagaaggaggaggaggaggaggaggaggaggag 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 78
Number of extensions: 31
Number of successful extensions: 31
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
