Query= MSMg01no115_h08.b1 MSMg01no115_h08.b1 CHROMAT_FILE:
MSMg01no115_h08.b1 PHD_FILE: MSMg01no115_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:24 2005
(261 letters)
>mm_chr8_68400727_68401387
Length = 661
Score = 460 bits (238), Expect = e-134
Identities = 244/246 (99%)
Strand = Plus / Minus
Query: 13 gaattcatttcggtaaaggatgctgtatccttgccacaccatatagacagctccccatag 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gaattcatttcggtaaaggatgctgtatccttgccacaccatatagacagctccccatag 337
Query: 73 ccccatctcccaatactgctagacctgtggttagagagcataacacaaattttcaagaaa 132
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 336 ccccatctcccaatactgctagacctgtggttagagagcataacgcaaattttcaagaaa 277
Query: 133 cactcaaagactccagctgttttattggctcatctcttttacttagcttacattaaacgt 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 cactcaaagactccagctgttttattggctcatctcttttacttagcttacattaaacgt 217
Query: 193 tgtctttaataatttttaaaaatactttattaagagagagagagagagagagagagagag 252
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 216 tgtctttaataatttttaaaaatactttattgagagagagagagagagagagagagagag 157
Query: 253 agagag 258
||||||
Sbjct: 156 agagag 151
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 261
Length of database: 661
Length adjustment: 9
Effective length of query: 252
Effective length of database: 652
Effective search space: 164304
Effective search space used: 164304
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no115_h08.g1 MSMg01no115_h08.g1 CHROMAT_FILE:
MSMg01no115_h08.g1 PHD_FILE: MSMg01no115_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:25 2005
(193 letters)
>mm_chr8_68300774_68301365
Length = 592
Score = 195 bits (101), Expect = 1e-54
Identities = 156/175 (89%), Gaps = 5/175 (2%)
Strand = Plus / Plus
Query: 1 aagtctctggccacagacacatgtcacaaccttgctgatagaaacaccttacaagtagta 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 aagtctctggccacagacacatgtcacaaccttgctgatagaaacactttacaagtagta 260
Query: 61 ggacaggagacat--tactcttcctcctactccttcttccttctaaaacttcacattagt 118
|||||||| | || |||||||||| |||| ||||||||||||| |||||||||||| |
Sbjct: 261 ggacagga-a-atgctactcttccttttactgcttcttccttctagaacttcacattact 318
Query: 119 aaagaacaaacttattgaggagagggtctaagaaataaatttgatagggtgttca 173
|| ||| |||| | |||||||| ||||| ||||||||||||||||||| ||||
Sbjct: 319 aa-gaaaaaacagacagaggagagagtctaggaaataaatttgatagggtattca 372
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 592
Length adjustment: 8
Effective length of query: 185
Effective length of database: 584
Effective search space: 108040
Effective search space used: 108040
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
