CCCTTTTATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
AGCCGCGGAATTCTCCATCTGTATCGGCAGGAATAACCCAGACTACCTTT
AGAGGAGGAGGAGGAGGNNNTNNCNNTTNNTCCCCCCCCCCACTTCTCCN
TCCATCCTCCCCACCTCTCCTTTGTCTTTTATATATCTCCACCCACACCC
TCCCCCCTCCTCAATCCTCATTCGCCCTTCAACCCTTCTCCCTTCCCTCC
CTCTTATGCAATCTGCAATCCTCTTTCTCCTCCCTTTCTCTCTCCCTGTC
TCTATCTCTCGTTAATGTATTCTTAGTGGAAATACACAATATTTTTTTTT
TCACACATATCGCTAGGCTAAGAGCTATCTAGGTATTTTTTTTTCTCCTC
TCCCGCCCAACCTGGGTCTATTGCGGTATTGAGATTACGGGTAGGGGTTA
GCTCATCCACGCCTATTAATCTTTATTTTATGAACCTAGCATGCTACTGT
ATATCTTCTTCTTTTTTATAATTTTTGTTAAACACTTCTATTTTCGCGTC
CTCTTGCTACATTTACCTATATCTCGTTATAGAACGGTATCGGATATGGG
ATGTGTTGGACTTCATATACGTTACTCATCCGTTACGCGGTATAGAGTCG
TACTCGGTTCGTCTGCCGCTTGGCCCGGTAACGGTTCATTCTCTGTAACG
GTCTGTTCCTTTATATAATGCTCTTAGTGCACTTACTGGCGTTATTAGTT
ATACCCACGTATTGCCTATTCGTGCGTGCTTATTCACACTTTATACGGGA
TATTCCTGTTATTACGAACGCAN

TTNNNTTACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCAGCTCTCCTACCTGGTCT
CCAAGCTTTGGCCTCTATCCTCTTCATGATCCTTTCAGATGCTAAGCCCT
TCTGTACAGGTTTTGATTTGTTTTACTGACTTTTTCAATTTGTTTGGGTT
TTTTGTTTTGTCTTCTGTCTCTATTTCCATGTCTTTATAGAATATCCTGT
ATTTTCTTCCTTATCTCCTTTAGCTGTTTGTTTGTGATCTCTTGGAGTTA
ACACAAGAGTTTTTTGTTTTTTTTTTTTTACTTGCTCTTTGATTTCTTCG
AACGTATTTATGTTCATTCCTTTGAATTTTTTATTTGGAGTATCATCAAA
GTCACTCTCCTCGGTGACCTCTACTGTGACACTAATAATTGTTGGTGGAA
ATACTTTGTTGCTTACGTTTTTTGTATTAGGACCTGGGTCTCAGGAGGGA
GTCAGACTCTTTATTAGATTTGTTGGTTTGGAAGCATTTGTCCATTTGTT
TCATCACCCTGCTTTTGATGCAAGTATTTGCAATGTTTAAGAGAGACTGG
GTTCTATTAGAATTGATGTATTGTTTTTCTCTATTAAACTGGCTTTTCGG
GCAACCGGCTGTATCTCTATCCTCTTCTGACCCAAAAACTGTCTACAACA
AGTG

Query= MSMg01no116_d18.g1 MSMg01no116_d18.g1 CHROMAT_FILE:
MSMg01no116_d18.g1 PHD_FILE: MSMg01no116_d18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:26 2005
         (488 letters)



>mm_chr8_91645606_91646493
          Length = 888

 Score =  944 bits (488), Expect = 0.0
 Identities = 488/488 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccagctctcctacctggtctccaagctttggcctctatcctcttcatgatcctttcagat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 ccagctctcctacctggtctccaagctttggcctctatcctcttcatgatcctttcagat 629

                                                                       
Query: 61  gctaagcccttctgtacaggttttgatttgttttactgactttttcaatttgtttgggtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gctaagcccttctgtacaggttttgatttgttttactgactttttcaatttgtttgggtt 569

                                                                       
Query: 121 ttttgttttgtcttctgtctctatttccatgtctttatagaatatcctgtattttcttcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ttttgttttgtcttctgtctctatttccatgtctttatagaatatcctgtattttcttcc 509

                                                                       
Query: 181 ttatctcctttagctgtttgtttgtgatctcttggagttaacacaagagttttttgtttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ttatctcctttagctgtttgtttgtgatctcttggagttaacacaagagttttttgtttt 449

                                                                       
Query: 241 tttttttttacttgctctttgatttcttcgaacgtatttatgttcattcctttgaatttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tttttttttacttgctctttgatttcttcgaacgtatttatgttcattcctttgaatttt 389

                                                                       
Query: 301 ttatttggagtatcatcaaagtcactctcctcggtgacctctactgtgacactaataatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ttatttggagtatcatcaaagtcactctcctcggtgacctctactgtgacactaataatt 329

                                                                       
Query: 361 gttggtggaaatactttgttgcttacgttttttgtattaggacctgggtctcaggaggga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gttggtggaaatactttgttgcttacgttttttgtattaggacctgggtctcaggaggga 269

                                                                       
Query: 421 gtcagactctttattagatttgttggtttggaagcatttgtccatttgtttcatcaccct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gtcagactctttattagatttgttggtttggaagcatttgtccatttgtttcatcaccct 209

                   
Query: 481 gcttttga 488
           ||||||||
Sbjct: 208 gcttttga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space:   419684
Effective search space used:   419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)