Query= MSMg01no117_c19.b1 MSMg01no117_c19.b1 CHROMAT_FILE:
MSMg01no117_c19.b1 PHD_FILE: MSMg01no117_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:38 2005
(346 letters)
>mm_chr8_91645817_91646562
Length = 746
Score = 654 bits (338), Expect = 0.0
Identities = 344/346 (99%)
Strand = Plus / Minus
Query: 1 caaatgttttgttttgttttgttttgttttttcaggacagtttctttgattatccctggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 caaatgttttgttttgttttgttttgttttttcaggacagtttctttgattatccctggt 648
Query: 61 tgtcccagaatcactctttagaccacgatgaccttgtactcacagagatccacctgcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tgtcccagaatcactctttagaccacgatgaccttgtactcacagagatccacctgcctc 588
Query: 121 tgattgccaagtgctggaattaaagcaccaccactgcccagatcgaatcttttctttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 tgattgccaagtgctggaattaaagcaccaccactgcccagatcgaatcttttctttgtt 528
Query: 181 tgtctgtttggttttgtgtttttaacttaacttgtcctttcctggaattctcagctctcc 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 527 tgtctgtttggttttgtgtttttaacttaacttgtcctttcctggaattcccagctctcc 468
Query: 241 tacctggcctccaagctttggcctctatcctcttcatgatcctttcagatgctaagccct 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tacctggtctccaagctttggcctctatcctcttcatgatcctttcagatgctaagccct 408
Query: 301 tctgtacaggttttgatttgttttactgactttttcaatttgtttg 346
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tctgtacaggttttgatttgttttactgactttttcaatttgtttg 362
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_c19.g1 MSMg01no117_c19.g1 CHROMAT_FILE:
MSMg01no117_c19.g1 PHD_FILE: MSMg01no117_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:38 2005
(464 letters)
>mm_chr8_91561978_91562842
Length = 865
Score = 872 bits (451), Expect = 0.0
Identities = 460/463 (99%), Gaps = 1/463 (0%)
Strand = Plus / Plus
Query: 1 cctcctcccatcgccctccagattcgctaccagaaaaatgtgggcttttgccttctgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctcctcccatcgccctccagattcgctaccagaaaaatgtgggcttttgccttctgaag 260
Query: 61 gatattgttggtaaaaagacaactagaagtctccaaccttagagaaaagaaacggtttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatattgttggtaaaaagacaactagaagtctccaaccttagagaaaagaaacggtttcc 320
Query: 121 caaacagcaccctataatttggtacttgtgccctgagccatagcagaaattggatgtaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaacagcaccctataatttggtacttgtgccctgagccatagcagaaattggatgtaaa 380
Query: 181 atacaccaacaattgctcaatgccgaaaagctaccttcccagtttatctcctgcctcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atacaccaacaattgctcaatgccgaaaagctaccttcccagtttatctcctgcctcagc 440
Query: 241 aggctttcccgggtgcttgttttttaacatttagaaagtatttgcagcctgaagcaaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggctttcccgggtgcttgttttttaacatttagaaagtatttgcagcctgaagcaaatc 500
Query: 301 gcaacaaaacaaaacaagaccaaaaaacagttcacattttctcatctagaatcttctatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcaacaaaacaaaacaagaccaaaaaacagttcacattttctcatctagaatcttctatt 560
Query: 361 atgccaaacttaaaaataggcttgatgaaacatgaattctttccaactgccttatcttgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgccaaacttaaaaataggcttgatgaaacatgaattctttccaactgccttatcttgc 620
Query: 421 aggtgtcagggttcttttcttgattttttttttggtt-atttg 462
|||||||||||||||||||||| |||||||||| ||| |||||
Sbjct: 621 aggtgtcagggttcttttcttgttttttttttttgtttatttg 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 865
Length adjustment: 10
Effective length of query: 454
Effective length of database: 855
Effective search space: 388170
Effective search space used: 388170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
