Query= MSMg01no117_g19.b1 MSMg01no117_g19.b1 CHROMAT_FILE:
MSMg01no117_g19.b1 PHD_FILE: MSMg01no117_g19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:58 2005
(502 letters)
>mm_chr8_7702294_7703195
Length = 902
Score = 868 bits (449), Expect = 0.0
Identities = 485/499 (97%), Gaps = 6/499 (1%)
Strand = Plus / Plus
Query: 7 aattctaactca---tacagtttaccacacagattttaatctacagaattacatctatag 63
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 aattctaactcagaata--gtttaccacacagattttaatctacagaattacatctatag 264
Query: 64 ggagcatgactcagtcatagttgagtttcttgggatttgtttccaggctgttgttccttc 123
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggagcatgactcagacatagtagagtttcttgggatttgtttccaggctgttgttccttc 324
Query: 124 taactaattgtcaatcaatatgtctcatatcaaaaaagatttatgctatatcatgatcaa 183
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 325 taactaattgtcaatcaatatgtctcatatcaaaaaagatttatactatatcatgatcaa 384
Query: 184 catagtgcagtttacagatcaaatatttacctgtcagattgttcccttggagcctggagc 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 385 catagtgcagtttacagatcaaatatttacctgtcagattgttcccttggagcctggaac 444
Query: 244 tcaagacacacaatgctgacgtctgaagcagacacaccaactttcagttaaggtaatgga 303
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 445 tcaagacacacaatgctgacgtctgaagcggacacaccaactttcagttaaggtaatgga 504
Query: 304 ctctgcctcagggtttgggattgattctatgtcctcaacactgtatataagaaacttaag 363
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 505 ctctgcctcagggtttgggattgattctatgtcctcaacactgtacataagaaacttaag 564
Query: 364 tgttagaaacaagttgagtctaataacacacatagtaagtaatgttaatgaagcaaaact 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgttagaaacaagttgagtctaataacacacatagtaagtaatgttaatgaagcaaaact 624
Query: 424 ctggcttacatatataatcaacgttctttcccttttcttcatatacaaatgatagtgaga 483
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 625 ctggcttacatatataatcaacgt-ctttcccttttcttcatataaaaatgatagtgaga 683
Query: 484 tataaatacaaaagatatc 502
||||||| |||||||||||
Sbjct: 684 tataaatgcaaaagatatc 702
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_g19.g1 MSMg01no117_g19.g1 CHROMAT_FILE:
MSMg01no117_g19.g1 PHD_FILE: MSMg01no117_g19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:59 2005
(478 letters)
>mm_chr8_7786340_7787217
Length = 878
Score = 862 bits (446), Expect = 0.0
Identities = 470/478 (98%)
Strand = Plus / Minus
Query: 1 ccaggtcgtgctctccctagttggcccttcagtctctgttccatttttttgtccctgttc 60
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 ccaggtcgtgcagtccctagttggcccttcagtctctgttccatttttttgtccctgttc 725
Query: 61 ttccattggacaggaacatttctgtgttaaaaactttgagaggggttagaagtatgatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ttccattggacaggaacatttctgtgttaaaaactttgagaggggttagaagtatgatga 665
Query: 121 ttaaggaactggcaaaactgagaagtaaggtttcaaagacaggcatgcatggaggcagat 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ttaaggaactggcacaactgagaagtaaggtttcaaagacaggcatgcatggaggcagat 605
Query: 181 tttaaatgtgcaaaccagttatttaccagctgatatattacttataaatttgacgtccac 240
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 604 tttaaatgtgcaaaccagttatttaccagctgatataagacttataaatttgacgtccac 545
Query: 241 tatcaagggagatgtttatcatttcctcagttagcttacattttaaataaacagttttgt 300
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 544 tatcaagggagatgtttatcatttcctcagttagcacacattttaaataaacagttttgt 485
Query: 301 tcttacctttaggctctccctttacttcttgtatatctttcacattagttgcttcaatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tcttacctttaggctctccctttacttcttgtatatctttcacattagttgcttcaatgt 425
Query: 361 tacatgtgtgaattacataaatatatatttatatactgcctcctccttttacaaacataa 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 424 tacatgtgtgaattacataaatatatatttatatactgcctcctccttctacaaacataa 365
Query: 421 agaaggctgagatgtctgaaagtctgagtatctgacagctctatttaagtgacagcac 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 agaaggctgagatgtctgaaagtctgagtatctgacagctctatttaagtgacagcac 307
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
