CATAATTTGCGGCGCTAAACGACTCCTATATCCAGAGATCCGCGGAATTC
ATTTTTTGTGCCAGAGTCTCACAGTGGCCTAAAACTCACTGGGAAGGCTA
AGCTGGCTAGCCGGCGAATGACGGCCATCTGCCCATCTCTGCTTCTCCTT
CAATGAAGTTTAAACACGTGCTACAACATCCATCTTTTCCCTGGGTCTTA
GATTTCATGCTTGCACAATTAACAGAGACATTGGAAGCCCCCCACACAGT
ACACCTCCAAGTCTTTGTCCCTATAGCCTTCTACTTTACCCCAAGTCAAA
TGCAGAAAACACCATCACTGTCAGCAGGTTTTATACCATCACCACCAGCA
GCTAGTGATTTTAAAGAACCACAGCAAAATGATGTCTACAATACACTACT
TAAAAAAAAATGCTTGCTTTTAGCTGTTCAGGGGCATTGTTCTTTTTCCA
AAACAAGCAGAAAATTGCAGCCAGCTGAGATGGAGAAGAGAGAGAGAGAG
AGAGAGAGAGAGATGTTCAGACAAAGCACATAGACAGCAGTGAGAACTAC
CTGAGTTCTCAGACCAGGAAGGAGACCCATCAACAGGACTCAGTGGCTGT
CTGCCATGGTTTAACTACACTCATTGCTGTGTGGGGAGGACAGGGTGTCC
TTACCTGGGTGGTGTGGCTCTCCCGATTTCTCTGAAATGATGAAG

ACCATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCACATGATGGTAGGTTGACAAATACAGACA
AGAAAGTCTTGGTGTGCTGCGTTGAAGACACAGTGCTCAGTTTGCTTTCT
GTTGCTATAATGAAACGCCACAGTCAGAAGCAAGCTGCAGAGGAAATGGT
TATTTGTGTTATAGCTTGTGGCTCATCATAATGGAAATCAGAGCAAAACT
TCAAGGCAGGAACCTAGAAACCAAAACAGAAGCCCTGGGTCTTAGAGGAG
TGCTGCTTATTGGCTTTCCTCAAGCCTTTCTCAGCTTGCTCTTTTATATA
ACCCACACTTGCTTGGCGACGGCACCACACACAATGGGCTAGGTGTTCCC
ACATTAATCATTAGCCCAGGAAATGCCCCCCAATCTACAGGACATCTGAT
GGAAGCATCACAGCCAACCTGCCGACCAAAGAGCTTCCCTGCAACTTCAG
GCTCTTTATGGAGGCTTTGCTTGTCACTGTAAGGAGCCTCAGTGTGTGCC
CTTGCTACGTGGGTGTGTACCTTGCCTGTAGCAAGGGCGACTGAAATTTC
TCTATTTCAAGAATCTTCTCTGTTGATGTCTATTACTTCAGTTCGTGAAA
AATTCTAGCATGGCTTTGTAAATCAGTTCTCACTAAACTATTCT

Query= MSMg01no118_e21.b1 MSMg01no118_e21.b1 CHROMAT_FILE:
MSMg01no118_e21.b1 PHD_FILE: MSMg01no118_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:06 2005
         (616 letters)



>mm_chr8_10604833_10605849
          Length = 1017

 Score = 1050 bits (543), Expect = 0.0
 Identities = 589/613 (96%), Gaps = 15/613 (2%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcattttttgtgccagagtctcacagtggcctaaaactcactgggaaggctaagct 64
           |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gaattcattttttgagacagagtctcacagtggcctaaaactcactgggaaggctaagct 587

                                                                       
Query: 65  ggctagccggcgaatgacggccatctgcccatctctgcttctccttcaatgaagtttaaa 124
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ggctagccggcaaatgacggccatctgcccatctctgcttctccttcaatgaagtttaaa 527

                                                                       
Query: 125 cacgtgctacaacatccatcttttccctgggtcttagatttcatgcttgcacaattaaca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 cacgtgctacaacatccatcttttccctgggtcttagatttcatgcttgcacaattaaca 467

                                                                       
Query: 185 gagacattggaagccccccacacagtacacctccaagtctttgtccctatagccttctac 244
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 466 gagacattggaagccccccacacagtacacctccaagtctttgtccctatagtcttctac 407

                                                                       
Query: 245 tttaccccaagtcaaatgcagaaaacaccatcactgtcagcaggttttataccatcacca 304
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 406 tttaccccaagtcaaatgcagaaaacaccatccctgtcagcaggttttataccatcacca 347

                                                                       
Query: 305 ccagcagctagtgattttaaagaaccacagcaaaatgatgtctacaatacactacttaaa 364
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 346 ccagcagctagtgattttaaagaaccacagcaaaatgatgtctacaatacgctacttaaa 287

                                                                       
Query: 365 aaaaaa-tgcttgcttttagctgttcaggggcattgttctttttccaaaacaagcagaaa 423
           |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 286 aaaaaaatgcttgcttttagctgttcagggacattgttctttttccaaaacaagcagaaa 227

                                                                       
Query: 424 attgcagccagctgagatggagaagagagagagagagagagagagagagatgttcagaca 483
           ||||||||||||||||||||||              ||||||||||||||||||||||||
Sbjct: 226 attgcagccagctgagatggag--------------gagagagagagagatgttcagaca 181

                                                                       
Query: 484 aagcacatagacagcagtgagaactacctgagttctcagaccaggaaggagacccatcaa 543
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 aagcacacagacagcagtgagaactacctgagttctcagaccaggaaggagacccatcaa 121

                                                                       
Query: 544 caggactcagtggctgtctgccatggtttaactacactcattgctgtgtggggaggacag 603
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 120 caggactcagtggctgtctgccatggttttactacactcattgctgtgtggggaggacag 61

                        
Query: 604 ggtgtccttacct 616
           |||||||||||||
Sbjct: 60  ggtgtccttacct 48


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1017
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1007
Effective search space:   610242
Effective search space used:   610242
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)