Query= MSMg01no118_p21.b1 MSMg01no118_p21.b1 CHROMAT_FILE:
MSMg01no118_p21.b1 PHD_FILE: MSMg01no118_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:00 2005
(199 letters)
>mm_chr8_119789161_119789758
Length = 598
Score = 369 bits (191), Expect = e-107
Identities = 197/199 (98%), Gaps = 1/199 (0%)
Strand = Plus / Plus
Query: 1 ccctggctaggttgaatgaataaatgtatttgttccaggcccagctggagaatctgtcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccctggctaggttgaatgaataaatgtatttgttccaggcccagctggagaatctgtcag 260
Query: 61 ccagggctgactagctgtgtaatgagcagcccccactcccacccagaggcccactggctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagggctgactagctgtgtaatgagcagcccccactcccacccagaggcccactggctt 320
Query: 121 caggcaatgtgtggttgtttttttttttttttctcatcagggttccagaggtatctttgt 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggcaatg-gtggttgtttttttttttttttctcatcagggttccagaggtatctttgt 379
Query: 181 tggcccctgccccatttat 199
||| |||||||||||||||
Sbjct: 380 tgggccctgccccatttat 398
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 598
Length adjustment: 8
Effective length of query: 191
Effective length of database: 590
Effective search space: 112690
Effective search space used: 112690
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no118_p21.g1 MSMg01no118_p21.g1 CHROMAT_FILE:
MSMg01no118_p21.g1 PHD_FILE: MSMg01no118_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:00 2005
(491 letters)
>mm_chr8_119885082_119885971
Length = 890
Score = 911 bits (471), Expect = 0.0
Identities = 486/491 (98%), Gaps = 1/491 (0%)
Strand = Plus / Minus
Query: 1 tatgttgtgtgtttatatttccctcccatttggcactcagagaaacttggacatgaggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tatgttgtgtgtttatatttccctcccatttggcactcagagaaacttggacatgaggga 631
Query: 61 gaccggcacgtcaatgcgtgtgggcctgaggggcttcccaaagcagggctctgcatagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gaccggcacgtcaatgcgtgtgggcctgaggggcttcccaaagcagggctctgcatagta 571
Query: 121 acgtagggaagtcccaggcacactgagtcgggaggctcgctcactttatacaagggctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 acgtagggaagtcccaggcacactgagtcgggaggctcgctcactttatacaagggctgc 511
Query: 181 cattaccctctatgagaatctctgcccatttcacaaccacggtcagggaccctggcctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 cattaccctctatgagaatctctgcccatttcacaaccacggtcagggaccctggcctct 451
Query: 241 gctaactctgtatcctgagagccatgaggcaagcagccatcagaacaggaataagactca 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gctaactctggatcctgagagccatgaggcaagcagccatcagaacaggaataagactca 391
Query: 301 tgaggggcaaattctgcttggtctgggcaggtggggcaccctgacccaggggacagctag 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 390 tgaggggcaaattctgcttggtctgggcaggtggggcaccctgagccaggggacagctag 331
Query: 361 gctcagctctggtaagagaaggcctacctcccaggaatgctgttgactaagaagagagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gctcagctctggtaagagaaggcctacctcccaggaatgctgttgactaagaagagagac 271
Query: 421 aatggatgtgcgctgcgttcaaggaccactggccttccatttgctttgtgctgcctgaag 480
||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 270 aatggatgtgcgctgtgttcaaggaccactggc-ttccatttgctttgtgctgtctgaag 212
Query: 481 ctagaagccag 491
|||||||||||
Sbjct: 211 ctagaagccag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 890
Length adjustment: 10
Effective length of query: 481
Effective length of database: 880
Effective search space: 423280
Effective search space used: 423280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
