CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAGATTCTCACCACCAACAAAATCAAACAACCCAATCAAAAAATG
GGGTATAGAAGTAAACTGAGAATTCACAACAGAAGAATCTGGGATGGCTG
AGAAGCACCTAAGGAAATATTCAAAGTCCCTAGTGCAAATCAAAATAACC
CAGAGATTCCATCTTACACCAATCAGAATAGCTAAGATCAAAAACGCAGG
TGACAACACATGTTGGCAAGGATGTGGAGAAAGGAGAACACTCCTCCATT
GCTGGTGGGATTGCAAACAGGTGCAACCACTCTAGAAATCAATCTGGAGG
TTCCTCAGAGAATTGGAAATGGATCTACCTGAAGACCCAGAAATAACACT
CTTGGGAATACCCAAAAGATGACCTGTCATCCCACAGAAACACATGTTCC
ACTATGTTCATAGTGGCCTTGTTTTTTGATCGCCAGAAGCTGGAAAAAAA
ACCCAGATATCCCATGACAGAAGGATGGTTACAGAAAATGTGTTGAGTTA
CACAATAGAATAGTACTCAGCTATTAAGAAAGAGGACATCCTGAGTTTTG
TAGGCAAATGAATGGAACTAGAAAATATTATCCTGAGTGAGGTAACTCAG
ACCCAAAAGATCATGCATGGTATGTACTCACTAATAAGTGGATACTAGTC
CTCCCCCCCAAAAAATTTAC

CAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXACAGTCTTTATTTCTCTATTTATTTCT
TATTTATTGAACATGTTCTTTGAAACAGCATATATCTAGAACAATTTGAT
ATCACAGACATAGACACTTTAAAAGTCACGATTGATTTGTTGAGCAAAAT
ACACTTCAACTTGGATTAGACAATCCTATGGAGGAATGAAAACCCTGATC
ATTGTTTCTCTGTGATGCCAACAAATATTCATTGTCATTCCTTAAAATTA
CTTCCCTAGAGGTTAAACTGAATGACTCCCAGCAATCATTCCTAGTTTGG
GGAAATAATATTATTTCATATAAATGTTCCATGAAGACATTTAAATCATC
TGGAGGTTTTCATTTAACAAATAAATATAATTTGAATGTTTCCCTTATTT
CTAATTTCAAGTAGTTGAGCTGGTTCCCAAGCAGGAACAACATGAAATTT
ATAACCTTATGAAATGGTGAAGGAATTCTTTTGGGGTATGTATATGATAG
TTGACATACATATAAATAAAATTCAAAATTTGTATGTCATATAAAATAAT
ATTTACTTTGATTCTTTGAAGTTTCATATACCATTCTATTTATGTAAAAT
ATGTAAAACAAAAAACATAAGCTTAACAAAATAAGTCCCGCGAATTTAAT
TTGCTTCTTG

Query= MSMg01no120_p10.g1 MSMg01no120_p10.g1 CHROMAT_FILE:
MSMg01no120_p10.g1 PHD_FILE: MSMg01no120_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:35 2005
         (580 letters)



>mm_chr8_53726977_53727953
          Length = 977

 Score = 1033 bits (534), Expect = 0.0
 Identities = 568/580 (97%), Gaps = 3/580 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acagtctttatttctctatttatttcttatttattgaacatgttctttgaaacagcatat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagtctttatttctctatttatttcttatttattgaacatgttctttgaaacagcatat 260

                                                                       
Query: 61  atctagaacaatttgatatcacagacatagacactttaaaagtcacgattgatttgttga 120
           |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||
Sbjct: 261 atctagaacaatttgatatcacagacata--cactttaaaagtcacgattgatttgttga 318

                                                                       
Query: 121 gcaaaatacacttcaacttggattagacaatcctatggaggaatgaaaaccctgatcatt 180
           | |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 319 gaaaaatacacttcaacttgtattagataatcctatggaggaatgaaaaccctgatcatt 378

                                                                       
Query: 181 gtttctctgtgatgccaacaaatattcattgtcattccttaaaattacttccctagaggt 240
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 379 gtttctctgtgatgccaacaaatattcattgtcattccttaaacttacttccctagaggt 438

                                                                       
Query: 241 taaactgaatgactcccagcaatcattcctagtttggggaaataatattatttcatataa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 taaactgaatgactcccagcaatcattcctagtttggggaaataatattatttcatataa 498

                                                                       
Query: 301 atgttccatgaagacatttaaatcatctggaggttttcatttaacaaataaatataattt 360
           |||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 499 atgtcccatgaagacatttaaatcatctggatgttttcatttaacaaatcaatataattt 558

                                                                       
Query: 361 gaatgtttcccttatttctaatttcaagtagttgagctggttcccaagcaggaacaacat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gaatgtttcccttatttctaatttcaagtagttgagctggttcccaagcaggaacaacat 618

                                                                       
Query: 421 gaaatttataaccttatgaaatggtgaaggaattcttttggggtatgtatatgatagttg 480
           ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 619 gaaatttataaccttgtgaaatggtgaaggaattcttttgggggatgtatatgatagttg 678

                                                                       
Query: 481 acatacatataaataaaattcaaaatttgtatgtcatataaaataatatttactttgatt 540
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 679 acatacatataaataaaattcaaaatttgtatgtcatataaa-taatatttactttgatt 737

                                                   
Query: 541 ctttgaagtttcatataccattctatttatgtaaaatatg 580
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ctttgaagtttcatataccattctatttatgtaaaatatg 777


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 977
Length adjustment: 10
Effective length of query: 570
Effective length of database: 967
Effective search space:   551190
Effective search space used:   551190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)