Query= MSMg01no124_b01.b1 MSMg01no124_b01.b1 CHROMAT_FILE:
MSMg01no124_b01.b1 PHD_FILE: MSMg01no124_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:39 2005
(542 letters)
>mm_chr8_15026025_15026968
Length = 944
Score = 965 bits (499), Expect = 0.0
Identities = 533/549 (97%), Gaps = 12/549 (2%)
Strand = Plus / Minus
Query: 1 agtgtctggaaaggcagttac--tgtgtgcccaggttttcctcatttgccatc-ggcacc 57
||||||||||||||||||||| ||||||||||||||||||||||||| |||| || | |
Sbjct: 744 agtgtctggaaaggcagttactgtgtgtgcccaggttttcctcatttgtcatctgg-agc 686
Query: 58 ctctgctgcttccttccacgtcaggtttcccacatcactctccacattcttgctcctgtc 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctctgctgcttccttccacgtcaggtttcccacatcactctccacattcttgctcctgtc 626
Query: 118 tgcagaaggaaagagggaagatttgagtttcattgttgagtgaaacgcttttaaaaccca 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgcagaaggaaagagggaagatttgagtttcattgttgagtgaaacgcttttaaaaccca 566
Query: 178 ggccctccgccagttgcagttagcaccctagtctggtggccacgtgtctgatcaccactg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggccctccgccagttgcagttagcaccctagtctggtggccacgtgtctgatcaccactg 506
Query: 238 gagtttggtggacagggaatacataatcact----cttttttcctccaggcgcaggacta 293
||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 505 gagtttggtggacagggaatacataatcactcagcc----ttcctccaggcgcaggacta 450
Query: 294 aaaagaacccagttcatgctctctgaggctccacctgctacccctgtgtggtcattattg 353
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aaaagaacccagttcatgctccctgaggctccacctgctacccctgtgtggtcattattg 390
Query: 354 caatcaagtctcttcctcagaaaggcaactgccaaatagcatgaaggcaaccaaagaagg 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 caatcaagtctcttcctcagaaaggcaactgccaaatagcatgaaggcaaccaaagaagg 330
Query: 414 tatgggcgggtgtctgaatccctaagaacactaggcggagttctcctgccctggcacaca 473
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tatgggtgggtgtctgaatccctaagaacactaggcggagttctcctgccctggcacaca 270
Query: 474 ctggcctctgccttgctggcgatctgaggggcaggttgttgtggtccagctgtattctag 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ctggcctctgccttgctggcgatctgaggggcaggttgttgtggtccagctgtattctag 210
Query: 534 ccttctgaa 542
|||||||||
Sbjct: 209 ccttctgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 944
Length adjustment: 10
Effective length of query: 532
Effective length of database: 934
Effective search space: 496888
Effective search space used: 496888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_b01.g1 MSMg01no124_b01.g1 CHROMAT_FILE:
MSMg01no124_b01.g1 PHD_FILE: MSMg01no124_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:39 2005
(336 letters)
>mm_chr8_14889464_14890199
Length = 736
Score = 574 bits (297), Expect = e-168
Identities = 318/325 (97%)
Strand = Plus / Plus
Query: 1 ctatacactggacttgttcccgtgttttgtatttttttatttaaacttttctctaggccc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctatacactggacttgttcccgtgttttgtatttttttatttaaacttttctctaggaag 260
Query: 61 agtgggaaaggctatgattaaggaaacctcagatattctgaaaatatgagattccactac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtgggaaaggctatgattaaggaaacctcagatattctgaaaatatgagattccactac 320
Query: 121 acccacccaagctctggtagacccgccctagcctctaggtgctagttgttatggaaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acccacccaagctctggtagacccgccctagcctctaggtgctagttgttatggaaacaa 380
Query: 181 agctcctagaccttgaaagctctccctgtgctattcaggaccgaatctcttcggatagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agctcctagaccttgaaagctctccctgtgctattcaggaccgaatctcttcggatagtg 440
Query: 241 agaatctggagaatccggctaggatagttagtgtatttttaaataagtcccagtagtgtt 300
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 441 agaatctggagaatccggctaggatagttagtggataggtaaataagtcccagtagtgtt 500
Query: 301 tctcttaggccactgagaaccacgt 325
|||||||||||||||||||||||||
Sbjct: 501 tctcttaggccactgagaaccacgt 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
