Query= MSMg01no126_c20.b1 MSMg01no126_c20.b1 CHROMAT_FILE:
MSMg01no126_c20.b1 PHD_FILE: MSMg01no126_c20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:27 2005
(283 letters)
>mm_chr8_118618862_118619544
Length = 683
Score = 540 bits (279), Expect = e-158
Identities = 282/283 (99%)
Strand = Plus / Plus
Query: 1 catttttgttctttggacatgatgtgcatatattatgtctgttcactgacatttattgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catttttgttctttggacatgatgtgcatatattatgtctgttcactgacatttattgga 260
Query: 61 agggtgagggagaagatgaaagggtgtggtcaccatgtcggttacagcctgattcatctg 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 agggtgagggagaagatgaaagggtgtggtcaccatgttggttacagcctgattcatctg 320
Query: 121 gtataaggtcaaagactagggagtcccccaggtgaacattattgcccagctatgtcttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtataaggtcaaagactagggagtcccccaggtgaacattattgcccagctatgtcttca 380
Query: 181 ataaggaaattagaggtctccacaaagaaacatcttatccatagggattattatagcaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataaggaaattagaggtctccacaaagaaacatcttatccatagggattattatagcaca 440
Query: 241 caatctgcacccatatgattttcttctaaagtacaactacact 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caatctgcacccatatgattttcttctaaagtacaactacact 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no126_c20.g1 MSMg01no126_c20.g1 CHROMAT_FILE:
MSMg01no126_c20.g1 PHD_FILE: MSMg01no126_c20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:27 2005
(300 letters)
>mm_chr8_118780605_118781305
Length = 701
Score = 507 bits (262), Expect = e-148
Identities = 292/302 (96%), Gaps = 4/302 (1%)
Strand = Plus / Minus
Query: 1 gaggctgtacctaggaggagaaaac-gacttttgttaaggcttgttcctggtcttctggc 59
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 372 gaggctgtacctaggaggagaaaacagacttttgttaaggcttgttcctggtcttctgtc 313
Query: 60 tgctttcctcttgagttttctttgcttaatttttccctaattgtcagaaacctagagcat 119
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 312 tgctttcctcttgagttttctttgcttaatttttccctaagtgtcagaaacctagagcat 253
Query: 120 cttcactgggtcagctgagaccctgctagaaacgctagctttgagtccacgaagatggct 179
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 252 cttcactgggtcagctgagaccctgctagaaacgcaagctttgagtccacgaagatggct 193
Query: 180 cagctggtaaaagcatctgccgccaagtctg-gtgacaggagctcaagccctagaacccg 238
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 192 cagctggtaaaagcatctgccgccaagtctgag-gacaggagctcaagccctagaacccg 134
Query: 239 tctggttgaaggaaggagagactcgcctcctgcagtttattcttttgattctccatgtgt 298
||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||
Sbjct: 133 tctggttgaaggaaggagagacttgattcctgcagtttattc-tttgattctccatgtgt 75
Query: 299 gc 300
||
Sbjct: 74 gc 73
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 701
Length adjustment: 9
Effective length of query: 291
Effective length of database: 692
Effective search space: 201372
Effective search space used: 201372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
