Query= MSMg01no126_o10.b1 MSMg01no126_o10.b1 CHROMAT_FILE:
MSMg01no126_o10.b1 PHD_FILE: MSMg01no126_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:27 2005
(363 letters)
>mm_chr8_63412913_63413677
Length = 765
Score = 513 bits (265), Expect = e-149
Identities = 338/365 (92%), Gaps = 10/365 (2%)
Strand = Plus / Minus
Query: 4 ggaattccagaggt-acccatataatattattgaat-attaattgtatgctactttttat 61
|||||||||||||| | ||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 381 ggaattccagaggtaagccatataatattattgaatga-taattgtatgctactttttat 323
Query: 62 ctttaggaactgcactttttttagaaaatagtttctttttttggttgttaacatgaaaaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ctttaggaactgcactttttttagaaaatagtttctttttttggttgttaacatgaaaaa 263
Query: 122 g-aaatttaaaacataaaactgggggctagagagatgtttcaactagagagatcatcag- 179
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gaaaatttaaaacataaaactgggggctagagagatgtttcaactagagagatcatcagt 203
Query: 180 -tctctctctctctctctctcacacacacacacacacacacacacacacacacacacaca 238
|||||||||||||||||||| | | | | | | | | | | | | | | | ||||||||
Sbjct: 202 ctctctctctctctctctctctctctctctctctctctctctctctctctctcacacaca 143
Query: 239 caaacacacacacacacatacacaccttctcaccactaatacatagcttataagtaagaa 298
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 caa----acacacacacatacacaccttctcaccactaatacatagcttataagtaagaa 87
Query: 299 aattaagtttaaacaacaaaaacttcagaaatgttttgttgccttaagttctttgatggc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 aattaagtttaaacaacaaaaacttcagaaatgttttgttgccttaagttctttgatggc 27
Query: 359 ttagt 363
|||||
Sbjct: 26 ttagt 22
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 765
Length adjustment: 9
Effective length of query: 354
Effective length of database: 756
Effective search space: 267624
Effective search space used: 267624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_o10.g1 MSMg01no126_o10.g1 CHROMAT_FILE:
MSMg01no126_o10.g1 PHD_FILE: MSMg01no126_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:28 2005
(395 letters)
>mm_chr8_63265094_63265887
Length = 794
Score = 690 bits (357), Expect = 0.0
Identities = 382/395 (96%), Gaps = 9/395 (2%)
Strand = Plus / Plus
Query: 1 tcatcctctcgtgacaatctgtcatgcttttatatttaaaggtccagtctcagtgtttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 tcatcctctcgtgacaatctgtcatgcttttatatttaaaggtccagtctccgtgtttcc 260
Query: 61 accatagaagctgcatcacattctcattagaaatcaaatgatcactttgaaaccgaaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accatagaagctgcatcacattctcattagaaatcaaatgatcactttgaaaccgaaaga 320
Query: 121 aattaggtggaggaaaaggtctgcattggagggcttagcatgaaactgggattttctgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattaggtggaggaaaaggtctgcattggagggcttagcatgaaactgggattttctgcc 380
Query: 181 tcctgtgtgaggaagtgagtgaatgatgagcataatatttatgccagccttgcaattgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctgtgtgaggaagtgagtgaatgatgagcataatatttatgccagccttgcaattgga 440
Query: 241 ttattctccgcctccaaaacagagctgctaatatcacactggttctctgggggaagagcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttattctccgcctccaaaacagagctgctaatatcacactggttctctgggggaagagcg 500
Query: 301 gttgtttatttccccactactcagtctatgcccgaagcagatgccccc----acagacta 356
||||||||||||||||||||||| ||||||||||||||||||| | ||||||
Sbjct: 501 gttgtttatttccccactactcattctatgcccgaagcagatg-----tttgaaagacta 555
Query: 357 tgattgcatatactgaacacacatggctttctgga 391
|||||||| ||||||||||||||||||||||||||
Sbjct: 556 tgattgcacatactgaacacacatggctttctgga 590
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 794
Length adjustment: 9
Effective length of query: 386
Effective length of database: 785
Effective search space: 303010
Effective search space used: 303010
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
