Query= MSMg01no128_d15.b1 MSMg01no128_d15.b1 CHROMAT_FILE:
MSMg01no128_d15.b1 PHD_FILE: MSMg01no128_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:15 2005
(521 letters)
>mm_chr8_41570162_41571082
Length = 921
Score = 955 bits (494), Expect = 0.0
Identities = 511/520 (98%), Gaps = 8/520 (1%)
Strand = Plus / Plus
Query: 7 gaattcactac----tcccgaaagacctggagagaa-agaataatgaaagatccttgcaa 61
||||||||||| | ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 205 gaattcactacaaact---gaaagacctggagagaatagaataatgaaagatccttgcaa 261
Query: 62 tcactcattcttgctaaagcgtttttgagttttgtttgtttgtttgtttttttcgagaca 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tcactcattcttgctaaagcgtttttgagttttgtttgtttgtttgtttttttcgagaca 321
Query: 122 gggtttctctgtgtagtcctggctgtcctggaactcactctgtagaccatgctggcctcg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gggtttctctgtgtagtcctggctgtcctggaactcactctgtagaccatgctggcctcg 381
Query: 182 aacttttgagagtgtttagggagagcagacatccgcacaattcattgtgggatccaggcg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aacttttgagagtgtttagggagagcagacatccgcacaattcattgtgggatccaggcg 441
Query: 242 ggtgcggttctgtggatgagggcaatgattgcttcctcgtctctcacgcttgagcgttgg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ggtgcggttctgtggatgagggcaatgattgcttcctcgtctctcacgcttgagcgttgg 501
Query: 302 atctgacaatctacttcacaagactcagaagatgaaggatgctctcccctttgtctttaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atctgacaatctacttcacaagactcagaagatgaaggatgctctcccctttgtctttaa 561
Query: 362 gcatgtcttgatcatttgtcattaccggaagtgccagactggagctcatagctcctgcta 421
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gcatgttttgatcatttgtcattaccggaagtgccagactggagctcatagctcctgcta 621
Query: 422 gaagtcttttgggcagcagcatgtggtgtatttgaagatctatgcagcagattttctgat 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gaagtcttttgggcagcagcatgtggtgtatttgaagatctatgcagcagattttctgat 681
Query: 482 agcacattgctcccttatctgttttccagggcaggagtct 521
||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 agcacattgctcccttatctgttttccagggcaggagtct 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no128_d15.g1 MSMg01no128_d15.g1 CHROMAT_FILE:
MSMg01no128_d15.g1 PHD_FILE: MSMg01no128_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:15 2005
(476 letters)
>mm_chr8_41677500_41678375
Length = 876
Score = 890 bits (460), Expect = 0.0
Identities = 472/476 (99%)
Strand = Plus / Minus
Query: 1 atattagttttcagataaagttttgtattcctgaataaggggcccccgaggcttgtgata 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 834 atattagttttcagataaagttttgtattcctgaataaggggccattgaggcttgtgata 775
Query: 61 ggctttgcctagggtctgtaggttgctttgggcagggtacttactactattgggtcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ggctttgcctagggtctgtaggttgctttgggcagggtacttactactattgggtcttct 715
Query: 121 actctaggaattcaagcatcattccatttgtatcttctggagagatgtttgtagtgtgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 actctaggaattcaagcatcattccatttgtatcttctggagagatgtttgtagtgtgca 655
Query: 181 gggtaggacttagttttcactcaggagcattgcctacttcaaaaggaggataaatttcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 gggtaggacttagttttcactcaggagcattgcctacttcaaaaggaggataaatttcat 595
Query: 241 tctttagttctgtctgtataaggctgtttatcagaagtcaagttaattgacattgtaggc 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 594 tctttagttctgtctgtataaggctgtttatcagaagtcaagttaaatgacattgtaggc 535
Query: 301 ctgggggtatgatcatcattgtcgtcatcatattatcaacagcgttaatggatttttaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ctgggggtatgatcatcattgtcgtcatcatattatcaacagcgttaatggatttttaca 475
Query: 361 ggtgctccagcttcttagaaattctagtggaagatgttcagggtgccatatactttagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ggtgctccagcttcttagaaattctagtggaagatgttcagggtgccatatactttagct 415
Query: 421 ttgactgatgggcaatgcgctgaagaagcagaattcctttaagagaattgtattca 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ttgactgatgggcaatgcgctgaagaagcagaattcctttaagagaattgtattca 359
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
