Query= MSMg01no128_f08.b1 MSMg01no128_f08.b1 CHROMAT_FILE:
MSMg01no128_f08.b1 PHD_FILE: MSMg01no128_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:23 2005
(189 letters)
>mm_chr8_18220912_18221500
Length = 589
Score = 327 bits (169), Expect = 3e-94
Identities = 184/189 (97%)
Strand = Plus / Plus
Query: 1 agatggtcaaaaattcattataaatcacagaaataatatagaagataatgaagtaacatt 60
||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 201 agatggtcaaaaattcattataaatcagagaaataatagagaagataatgaagtaacatt 260
Query: 61 attaaaaaaaataaaaaaacttgttaacccattccaggtgcggtagaatttacataagca 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcaaaaaaaataaaaaaacttgttaacccattccaggtgcggtagaatttacataagca 320
Query: 121 gaagatatataccctagtactcggcagtgaagacatgagagcctgggctatctcaagaac 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 gaagatatataccctagtactcggcagtgaagacaggagagcctgggctatctcaagaac 380
Query: 181 atcaagcta 189
|||||||||
Sbjct: 381 atcaagcta 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no128_f08.g1 MSMg01no128_f08.g1 CHROMAT_FILE:
MSMg01no128_f08.g1 PHD_FILE: MSMg01no128_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:23 2005
(341 letters)
>mm_chr8_18344176_18344916
Length = 741
Score = 615 bits (318), Expect = e-180
Identities = 336/342 (98%), Gaps = 2/342 (0%)
Strand = Plus / Minus
Query: 1 tgccctaagtaagcatggcaattctaaaggctcttaggagaagagggttaactagccagt 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 541 tgccctaagtaagcatggcaattctaaaggctcttaggagcagagggttaactagccagt 482
Query: 61 taaccaaccatatgcactttgtgcaaatcaggtcccctactggggacactgg-gaagcag 119
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 481 taaccaaccatatgcactttgtgcaaatcaggtcccctactggggacac-ggagaagcag 423
Query: 120 aaataacttcttagagttactaacatttctagtttaagagtggaacaatattggagtttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaataacttcttagagttactaacatttctagtttaagagtggaacaatattggagtttc 363
Query: 180 aagactgagcactacaatgtcaggctttggctttttgaagcagaagatttattctggaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aagactgagcactacaatgtcaggctttggctttttgaagcagaagatttattctggaaa 303
Query: 240 ggctagagataggctttgagcctgggctgatgtcatagacatcttatgggcctacatgaa 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 302 ggctagagataggctttgagcctgggctgatgtcatagacatcttatgggcctatatgta 243
Query: 300 tcagagctgtggtgtggctgttgccactggactcttcaaggc 341
||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 242 tcagagctgtggtgtggctgttgccactggactctccaaggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
