Query= MSMg01no128_h10.b1 MSMg01no128_h10.b1 CHROMAT_FILE:
MSMg01no128_h10.b1 PHD_FILE: MSMg01no128_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:34 2005
(266 letters)
>mm_chr8_47030596_47031262
Length = 667
Score = 449 bits (232), Expect = e-130
Identities = 253/260 (97%), Gaps = 1/260 (0%)
Strand = Plus / Minus
Query: 7 gaattctcctgattcctgaattaaaagcatttcctaagctggaacgtatgcttgaaccac 66
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gaattctcctgaagactgaattaaaagcatttcctaagctggaacgtatgcttgaaccac 407
Query: 67 ctatttcatcatcatacactgaataatttgttataagttaatttattaatctgacttttt 126
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 406 ctattttatcatcatacactgaataatttgttacaagttaatttattaatctgacttttt 347
Query: 127 attatttatcactgtatttccaatgatggtattttgtttaaaacatc-aaaaaatgaact 185
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 346 attatttatcactgtatttccaatgatggtattttgtttaaaacatcaaaaaaatgaact 287
Query: 186 aatagttaatgcttattatgcgttggcagccattctatgtaccattctattaaatgtgtt 245
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 286 aatagttaatgcttattatgcgttgggagccattctatgtaccattctattaaatgtgtt 227
Query: 246 tgtggtggttaaccatttgg 265
||||||||||||||||||||
Sbjct: 226 tgtggtggttaaccatttgg 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 266
Length of database: 667
Length adjustment: 9
Effective length of query: 257
Effective length of database: 658
Effective search space: 169106
Effective search space used: 169106
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no128_h10.g1 MSMg01no128_h10.g1 CHROMAT_FILE:
MSMg01no128_h10.g1 PHD_FILE: MSMg01no128_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:34 2005
(169 letters)
>mm_chr8_46880682_46881252
Length = 571
Score = 308 bits (159), Expect = 2e-88
Identities = 168/171 (98%), Gaps = 2/171 (1%)
Strand = Plus / Plus
Query: 1 cggatggagccagtcttccaccgaggaggtgcccagggacgtggtgcccactcgcatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cggatggagccagtcttccaccgaggaggtgcccagggacgtggtgcccactcgcatttc 260
Query: 61 ggaatttgaaaagctgattcagaagtcgaagtctatgcccaatctatga-atgaaatgtt 119
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 261 ggaatttgaaaagctgattcagaagtcgaagtctatgcccaatctaggagatgaaatgtt 320
Query: 120 atctcctataaccctagaacccccacaaaatggtt-gtgtcccaagaggcg 169
||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 atctcctataaccctagaacccccacaaaatggtttgtgtcccaagaggcg 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 571
Length adjustment: 8
Effective length of query: 161
Effective length of database: 563
Effective search space: 90643
Effective search space used: 90643
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
