NTTATCXXXXXXXXXXXXXXXXXXXXXXXXXXXATCAAAAGAGGATCCGC
GGAATTCTTTTTCCACCCCATCCATGATACTGAGGGCCACAGAAGTTATG
TGTTGCATCTATAACACGGCTGGAGTTGAAGCCAGCCTGCTGAGCCTCGG
AAGCAAGCAGAACATAGAGGAGATTAAGAAAAGAATTGACAACATTTATG
GAACTCTGATGTGTGCCAAGCTACATTCTTTACACTCATTATCTTATGTT
ATGTCATACCAAATGCATGGGCTAGCTGTTCACAAAAACATAAATAGTGG
CTGACATCTGCTGATGCCTGGTGTTCCTCAGAGAACAAACCAGGGGTTTT
GTAAATATTACTTCATTTTTTCTCCTCCCCCAGAACCATGTGAAGTAGTT
GTGAATGCTGTTTATCATCCCATTTAGCTGAAGAGTAAACTGAGGGGAGG
GCAGTCATATGTCCCTAGAGAGTCAGGAATAAGCCTAAGAGCTCATGTTA
GCGAGACCTGTGAGACTATCGTCCCATATGCCACTTTTATCTGCTGTCTA
CCCAGATCTCTGTCTACCTTGGGACTTGAAGCTAAAGAGTTGTTGCTCTG
GGTCCCATCCACACAGTCTGACCCTCCAACACCACTGTGACACCACTACT
CTAAGCAGGGCCAGCTACCTGAGATCAATTGGTGACAGTCAAATCTCC

CAACCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTACCTGTGCAGTGGGGCCTCAAC
CCCACGAAGAAACTTTTCTCCATGTCCTGCCTGTCTTTGCAGTAGGTCTG
AGGGCACACCTCTGTCTTCCTGTTCTTTGTCCTGTTTGTCCCTTTATCTC
TTCTCAACTCCATTGTGTGTGTTCTACCTGCCAACTGCACTAGATTCGAG
ACTTCCAGCTTCTATTTAAGTCCTAAATAATCTCCAGCCATGGTGACGCT
TCCCTACTACAATAGTATTATTTACTTGTCTTTGTTTAAAATGTACACAA
GAACATTTTTTTTATTCCCACGCCGCCTACTAGGGTAACAGAAACTGGGC
TTCCCGGGTGGTATCTGACAAAAAGTGAAGGTGGCTTTGGTAGTAAAAGA
AATGACAGGCCGTTACTATTAAATGTTGTCTGACATTGTTGGGCTATTTA
CTATGTGTTCTGTCATGAACAAGGCAGTGCACAAGCATATAGACTTATCT
GAGCCCCCAAAGTTAAGCGCATACTACGGTTGCTAGGTGCTTCTGCAAGA
CACATGATTCCAACCTTCTTCGCACTCCTGAAGATCCTCTCTGTACTGCT
TGGTTTTAACTGCCAACTGGGCCTGTGAGCATGTTTGATGTGAGN

Query= MSMg01no131_c09.b1 MSMg01no131_c09.b1 CHROMAT_FILE:
MSMg01no131_c09.b1 PHD_FILE: MSMg01no131_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:16 2005
         (625 letters)



>mm_chr8_117576673_117577697
          Length = 1025

 Score = 1147 bits (593), Expect = 0.0
 Identities = 617/625 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccatgatactgagggccacagaagttatgtgttgcatctataacacggctggagttgaag 60
           ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 825 ccatgatactgagggccacagaagttatgtgttgcatctataacatggttggagttgaag 766

                                                                       
Query: 61  ccagcctgctgagcctcggaagcaagcagaacatagaggagattaagaaaagaattgaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 ccagcctgctgagcctcggaagcaagcagaacatagaggagattaagaaaagaattgaca 706

                                                                       
Query: 121 acatttatggaactctgatgtgtgccaagctacattctttacactcattatcttatgtta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 acatttatggaactctgatgtgtgccaagctacattctttacactcattatcttatgtta 646

                                                                       
Query: 181 tgtcataccaaatgcatgggctagctgttcacaaaaacataaatagtggctgacatctgc 240
           ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 645 tgtcatatcaaatgcatgggctagctgttcacaaaatcataaatagtggctgacatctgc 586

                                                                       
Query: 241 tgatgcctggtgttcctcagagaacaaaccaggggttttgtaaatattacttcatttttt 300
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tgatgcctggtgttcctcagggaacaaaccaggggttttgtaaatattacttcatttttt 526

                                                                       
Query: 301 ctcctcccccagaaccatgtgaagtagttgtgaatgctgtttatcatcccatttagctga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ctcctcccccagaaccatgtgaagtagttgtgaatgctgtttatcatcccatttagctga 466

                                                                       
Query: 361 agagtaaactgaggggagggcagtcatatgtccctagagagtcaggaataagcctaagag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 agagtaaactgaggggagggcagtcatatgtccctagagagtcaggaataagcctaagag 406

                                                                       
Query: 421 ctcatgttagcgagacctgtgagactatcgtcccatatgccacttttatctgctgtctac 480
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ctcatgttagtgagacctgtgagactatcgtcccatatgccacttttatctgctgtctac 346

                                                                       
Query: 481 ccagatctctgtctaccttgggacttgaagctaaagagttgttgctctgggtcccatcca 540
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ccagatcactgtctaccttgggacttgaagctaaagagttgttgctctgggtcccatcca 286

                                                                       
Query: 541 cacagtctgaccctccaacaccactgtgacaccactactctaagcagggccagctacctg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 cacagtctgaccctccaacaccactgtgacaccactactctaagcagggccagctacctg 226

                                    
Query: 601 agatcaattggtgacagtcaaatct 625
           |||||||| ||||||||||||||||
Sbjct: 225 agatcaatcggtgacagtcaaatct 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space:   624225
Effective search space used:   624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no131_c09.g1 MSMg01no131_c09.g1 CHROMAT_FILE:
MSMg01no131_c09.g1 PHD_FILE: MSMg01no131_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:16 2005
         (235 letters)



>mm_chr8_117448057_117448691
          Length = 635

 Score =  418 bits (216), Expect = e-121
 Identities = 228/232 (98%)
 Strand = Plus / Plus

                                                                       
Query: 2   gtcctgcctgtctttgcagtaggtctgagggcacacctctgtcttcctgttctttgtcct 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gtcctgcctgtctttgcagtaggtctgagggcacacctctgtcttcctgttctttgtcct 261

                                                                       
Query: 62  gtttgtccctttatctcttctcaactccattgtgtgtgttctacctgccaactgcactag 121
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 262 gtttgtccctttatctcttctcaactccattgtgtgtgttcaacctgccaactgcactag 321

                                                                       
Query: 122 attcgagacttccagcttctatttaagtcctaaataatctccagccatggtgacgcttcc 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 attcgagacttccagcttctatttaagtcctaaataatctccagccatggtgacgcttcc 381

                                                               
Query: 182 ctactacaatagtattatttacttgtctttgtttaaaatgtacacaagaaca 233
           ||||||| |||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctactactataggagtatttacttgtctttgtttaaaatgtacacaagaaca 433


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space:   141476
Effective search space used:   141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)