CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGACAGTATTCTTTTTTATACTTCTCAGTTGTATACATCTACAAC
CATTGCATTGCTCATCGAAAACAACCATTAAGTTTTAGCAAATTTTATCT
TCAAAATAGTTTGTGGGAGCTCTTCCAGTCTGTGACTCCCTGACAGCATC
AGGAAGAAGCAGGGTCTATATAGGTACCTGTCTAGAACCCCTATCCTTCA
CTCTAGACTAACATTCGGTCTATCTTGGTACTCTCTGTCCAAGTTCAAAT
GGCTTCCAGCTGTTTTCCAAGGACAACATGGGACTCTATTCCTTGGGTGT
CACAATAAATACAACTATATTGTGTCTGTCCCATGCCTAAGTAGTTATGG
CAGTATTGATCCATACAGGATGTGCACATGTACATGTGTGAGTCCCATAT
TACAGGCGTATTTCTCTCTCCATCTCTTTCTTCTCATTTAATCTAAGAAT
GTTACTATTCTTGAATAATCTTTCAATCTCATCTTGTGTTTATGATTTTA
AATGTTAGAAGTAAAATGGGATTAGACTGACAATTTGTTTCATTCTCTTT
CTAGCATACTCTATTTGAGGAACTTTTAGTTCCTGGACAGTGTAAAAAAG
GTCTGAATGCAAAGATATGAGTTCAGAACAAAATTTCTCAGTGTTTAAAG
AGAGGATCATATTAC

AATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCACCTGAGGAATACTGAATGGCTGAGAAGCA
CCTGAAAAATGTTCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAAC
AACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGTTCAAATATT
CAGGTGACAACAGATGCTGTCGAGGATGTGAATTAAGAGGAACACTCCTC
CATTGTTGGTGGTATTGAAGCTTGTACTGGAAATCAGTCTGGCGGTTCCT
CAGAAAATTGGACATAGTACTACAGGAGGATCCCACAAACCTCTCCTGGG
CATATATCCAGAGATGTTCCAACCGGTAAGAAGGACACATGCTCCACTAT
GTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGAT
GCTCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATG
GAGTACTACTCAGCTATTAAAAAGAATGAATTCATGAAATTCCTAGGCAA
TGGTTGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCATAAAA
GAACTCACATGATATGTACTCACTGATAAGTGCATATTAGCCCAGAAACT
TCAAATACCCAAGATATAAGATACAATTTGCAAAATACATGAAACTCAAG
AAGAACGAAG

Query= MSMg01no132_i16.b1 MSMg01no132_i16.b1 CHROMAT_FILE:
MSMg01no132_i16.b1 PHD_FILE: MSMg01no132_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:05 2005
         (670 letters)



>mm_chr8_77967273_77968341
          Length = 1069

 Score = 1241 bits (642), Expect = 0.0
 Identities = 660/666 (99%), Gaps = 1/666 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctgacagtattcttttttatacttctcagttgtatacatctacaaccattgcat 63
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 204 ggaattctgacagtatt-ttttttatacttctcagttgtatacatctacaaccattacat 262

                                                                       
Query: 64  tgctcatcgaaaacaaccattaagttttagcaaattttatcttcaaaatagtttgtggga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgctcatcgaaaacaaccattaagttttagcaaattttatcttcaaaatagtttgtggga 322

                                                                       
Query: 124 gctcttccagtctgtgactccctgacagcatcaggaagaagcagggtctatataggtacc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gctcttccagtctgtgactccctgacagcatcaggaagaagcagggtctatataggtacc 382

                                                                       
Query: 184 tgtctagaacccctatccttcactctagactaacattcggtctatcttggtactctctgt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgtctagaacccctatccttcactctagactaacattcggtctatcttggtactctctgt 442

                                                                       
Query: 244 ccaagttcaaatggcttccagctgttttccaaggacaacatgggactctattccttgggt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ccaagttcaaatggcttccagctgttttccaaggacaacatgggactctattccttgggt 502

                                                                       
Query: 304 gtcacaataaatacaactatattgtgtctgtcccatgcctaagtagttatggcagtattg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 503 gtcacaataaatacaactatattgtgtctgtcccatgcctaagtagttatggcagcattg 562

                                                                       
Query: 364 atccatacaggatgtgcacatgtacatgtgtgagtcccatattacaggcgtatttctctc 423
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 563 atccatacaggatgtgcacatgtacatgtgtgagtcccatattacaggcgtatttctccc 622

                                                                       
Query: 424 tccatctctttcttctcatttaatctaagaatgttactattcttgaataatctttcaatc 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 623 tccatctctttcttctcatttaatctaagaatgttactattcttgaataatccttcaatc 682

                                                                       
Query: 484 tcatcttgtgtttatgattttaaatgttagaagtaaaatgggattagactgacaatttgt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 683 tcatcttgtgtttatgattttaaatgttagaagtaaaatgggattagactgactatttgt 742

                                                                       
Query: 544 ttcattctctttctagcatactctatttgaggaacttttagttcctggacagtgtaaaaa 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ttcattctctttctagcatactctatttgaggaacttttagttcctggacagtgtaaaaa 802

                                                                       
Query: 604 aggtctgaatgcaaagatatgagttcagaacaaaatttctcagtgtttaaagagaggatc 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 aggtctgaatgcaaagatatgagttcagaacaaaatttctcagtgtttaaagagaggatc 862

                 
Query: 664 atatta 669
           ||||||
Sbjct: 863 atatta 868


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1069
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1059
Effective search space:   698940
Effective search space used:   698940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)