CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCAAGGTTTTTCGTGAAGTGATAATATAATACAGCTCACACCCACC
CAACTTTCTATTTCAATGTTATTCACTTGCAATTTTAATTTTGGCCTTCC
TATCATTAACAATTTTTCACCAAAATACACGTTTTCCTGTATTTCCAAAC
TGTCCTGATCTTACCTCTGAGCAGCTTTGCCCTGATATAGGGAGACTAAC
AGCTGAGTAGCCCTACCACCTGTGTTAGCTAGCGTCTCTCTGTTTACATA
AGCCATTACTTCAATTTCTCCTTTAAAATCTTCATCTATAATTCCTGGAG
GCACAATGAATCCTTGTGAAGTTAAACTCTTCCTTCCCAAGATCACCCTT
ACTGTCCCTGAGTGTAACCCCCCCCATCTCAGGCTTCACTGTTAGCAAGA
AGAGAGCAAGGGGTGGAGCCCGCCGCCCCATCCTTTTGCCACTCCCACTG
CTGGAGCCTGTTGCCCTGCAACTTTACTCCAGGATGATTTGGCGGGAATG
GGCCCCTTCCCCTGCTTCATAACCCAGTGTCAGGAATAGTAAAATCGAAC
CTTGATCAAAGCGGTTGTCTTGGTTCCATCTTTCTCGCGCCTCCTAGCCC
CCCTCTTCTTTTCCAGATTCCAAGATACCTTTCCAGACTAGAACCCAGAC
ATGTGAGCAGCTGGCCG

CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXACTTTGTAGACCAGGCTGGCCTCAAACTCAGAA
ATCCGCCTGCCTCTGCCTTCCGAGTGCTGGGATTAAAGGCGTGCGCCACC
AGGCCCGGCTAAACAATTGCTTAGAGTATAAATTTTGAGATGGCCACTTG
CGTGTTTAGGAGGGTGACACATTAATGTGCTCTCACAAGGAACGCTATCC
AAGTCCTGGCACACAAGCTAATGTGTCACCAGGTATCAGCCCCTCTACTT
TCCTATGGCTGAAATTGGCATAGTGTTTATTAAAATGATTTTGGCAATAT
TCTCACAAGCCAAGTTAAAAGGAAAATTTCATTATCAAATTCTCAGTATT
TTCAGCACTAAGAACCTAGTGCTAAAGGGGAGTTCTTTGTGAACACAGGC
TCAGCTTATGTGAGGGGTGAGCACAGGCTCAGCTCATGTGAGGGGTGCAT
CTGGGTCGTAATCTCCAATGTCCTGAGACAGCAAACACTCAACCTGCTTT
CTCCCCACTGTCTCTCTCCATGAACTCGAGGGGAGCTGCTTGCATGCAGC
AGGGCGCAGCTGGCCACTTCTGTGAGTCCACTGTGACCAGGTAAGTGGGC
CAAAGCCATGATTGCCTGTGTCTCAGTTGGCCCCTGACCAAGTGGAGGAC
N

Query= MSMg01no135_h01.g1 MSMg01no135_h01.g1 CHROMAT_FILE:
MSMg01no135_h01.g1 PHD_FILE: MSMg01no135_h01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:34 2005
         (625 letters)



>mm_chr8_127553540_127554564
          Length = 1025

 Score =  919 bits (475), Expect = 0.0
 Identities = 606/723 (83%), Gaps = 112/723 (15%)
 Strand = Plus / Minus

                                                                       
Query: 1   actttgtagaccaggctggcctcaaactcagaaatccgcctgcctctgccttccgagtgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 723 actttgtagaccaggctggcctcaaactcagaaatccgcctgcctctgcctcccgagtgc 664

                                                                       
Query: 61  tgggattaaaggcgtgcgccaccaggcccggctaaacaattgcttagagtataaattttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tgggattaaaggcgtgcgccaccaggcccggctaaacaattgcttagagtataaattttg 604

                                                                       
Query: 121 agatggccacttgcgtgtttaggagggtgacacattaatgtgctctcacaaggaacgcta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 agatggccacttgcgtgtttaggagggtgacacattaatgtgctctcacaaggaacgcta 544

                                                                       
Query: 181 tccaagtcctggcacacaagctaatgtgtcaccaggtatcagcccctctactttcctatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tccaagtcctggcacacaagctaatgtgtcaccaggtatcagcccctctactttcctatg 484

                                                                       
Query: 241 gctgaaattggcatagtgtttattaaaatgattttggcaatattctcacaagccaagtta 300
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gctgaaattggcacagtgtttattaaaatgattttggcaatattctcacaagccaagtta 424

                                                                       
Query: 301 aaaggaaaatttcattatcaaattctcagtattttcagcactaagaacctagtgctaaag 360
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aaaggaaaatttctttatcaaattctcagtattttcagcactaagaacctagtgctaaag 364

                                                                       
Query: 361 gggagttctttgtgaacacaggctcagcttatgtgaggggtgagcacaggctcagct--- 417
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 363 gggagttctttgtgaacacaggctcagcttatgtgaggggtgagcacaggctcagcttat 304

                                                                       
Query: 418 ------------ca---------------------------------------------- 419
                       ||                                              
Sbjct: 303 gtgaggggtgagcacaggctcagcttatgtgaggggtgaacacaggctcagcttatgtga 244

                                                                       
Query: 420 ---------------------------------------------------tgtgagggg 428
                                                              |||||||||
Sbjct: 243 ggggtgaacacaggctcagcttatgtgaggggtgagcacaggctcagcttatgtgagggg 184

                                                                       
Query: 429 tgcatctgggtcgtaatctccaatgtcctgagacagcaaacactcaacctgctttctccc 488
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 183 tgcatctgggtcgtaatctccaacgtcctgagacagcaaacactcaacctgctttctccc 124

                                                                       
Query: 489 cactgtctctctccatgaactcgaggggagctgcttgcatgcagcagggcgcagctggcc 548
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 cactgtctctctccatgaactcgaggggagctgcttgcatgcagcagggcgcagctggcc 64

                                                                       
Query: 549 acttctgtgagtccactgtgaccaggtaagtgggccaaagccatgattgcctgtgtctca 608
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  acttctgtgattccactgtgaccaggtaagtgggccaaagccatgattgcctgtgtctca 4

              
Query: 609 gtt 611
           |||
Sbjct: 3   gtt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space:   624225
Effective search space used:   624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)