CCCCNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA
TGCGCGGAATTCTCAACTGAGTACCTGCAAATGACTGAGAAGCACTTAGA
CATTCCACATCCTTAGCAATCAGGGAAATGCAAATCAAAATGACCCTGAG
ATTAAACCTCACACCAATCAGAATGGATAAAATAAAAAACTCAGGTGACA
GCAGATGCTGGTGAGAATGTACAGAAACAAAAATCTCTTCCATTACTCAT
GGGACTGCAAACTGGTAAAACCACTTTGGAAATCAATCTGGTGGTTCCTC
AGAAAGTTATAAATAGTTCTACCTGAAGACCCAGTTCTACTACTCCTGGG
CATATACCCAAAAGATGCTCCAAAATATAACATGTTCCACTATGTTTATA
GCAACCATATTTATTATAGCCAGAAGCTGGGAACAACCTAGATGTCCTTC
AACAGATGAATGAACACAGAAAATGTGGTACATTTATACAGCTATTAAAA
AGAATAGCTTCATGAAATTCTTAGGCAAGTATGATAATATCATCCTGACT
GAGGACACAAAAGAACACACATGGAATGTACACACTAATAAGTGAAAATT
AGCCCAAAAGTTCAGAATACCTGTGATATAACCCACAAACCATAAGGAGC
TTACAAGTGTGGATGCCGCAATCCTCTATAGAAGGAAAACGTGCATTTAT
TTGGATAGAATAAG

NNNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXACACTCAATGGACAACTGTTC
TACACCATAGTCACACCTGTGAAGAATTTTAATATGGATGTCTTCAATAA
GAAGGCATCACGGAAGAAAGAGAGAACAATAAAAAATGTTGATGTAACTT
ACACAGAAACTTTAGTTTTATGCTCTTTCTTACGAGCATTTTTTTAGGCA
TTCTCCTTGCATCTTCTATAGTTTTTAAGTTTAGTAAGTTAAAAATCTAA
AACTAAAATTTTACAGTTTTCTTTGCAAGTTAACTGTAATAAGTATCTCA
GTATATGCAGAAATTTAACTTTGAAATAAAATGATTTATTCATATATAAT
TGTTTATTGTACGTTATAATGCTATATATAGGAAAACATATAAAGAGATT
TTACAATCTCAAAACTTAATTTCTATGGTGTTTTTTAACAAAGGCCGGCA
ATTCTTAGATTCTTGTTCTATAACTGCTATTTGGCAAGAGCCACTTCAGA
CACCATCTGCAGTATTACTGCAGGCTCATCACTGCAATGTCTTTCCTCAT
AAAACTATGAATATTGGCGAGTAAAACTTCTATAATGTTTTTCTGAAATT
TAAAACCCTTTATTGCCTGGCAAAAGGAACTTGATATCAACTTTCCAAAC
TCCTAATTTTN

Query= MSMg01no138_f06.g1 MSMg01no138_f06.g1 CHROMAT_FILE:
MSMg01no138_f06.g1 PHD_FILE: MSMg01no138_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:20 2005
         (544 letters)



>mm_chr8_64987512_64988455
          Length = 944

 Score = 1013 bits (524), Expect = 0.0
 Identities = 539/544 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   acactcaatggacaactgttctacaccatagtcacacctgtgaagaattttaatatggat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 acactcaatggacaactgttctacaccatagtcacacctgtgaagaattttaacatggat 260

                                                                       
Query: 61  gtcttcaataagaaggcatcacggaagaaagagagaacaataaaaaatgttgatgtaact 120
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcttcaataagaaggcatcacagaagaaagagagaacaataaaaaatgttgatgtaact 320

                                                                       
Query: 121 tacacagaaactttagttttatgctctttcttacgagcatttttttaggcattctccttg 180
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 tacacagaaactttagttttatgctctttcttacgaacatttttttaggcattctccttg 380

                                                                       
Query: 181 catcttctatagtttttaagtttagtaagttaaaaatctaaaactaaaattttacagttt 240
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 catcttctatagtttttaagtttagtaagttaaaaatctaaaactataattttacagttt 440

                                                                       
Query: 241 tctttgcaagttaactgtaataagtatctcagtatatgcagaaatttaactttgaaataa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctttgcaagttaactgtaataagtatctcagtatatgcagaaatttaactttgaaataa 500

                                                                       
Query: 301 aatgatttattcatatataattgtttattgtacgttataatgctatatataggaaaacat 360
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 aatgatttattcatatataattgtttattgtacattataatgctatatataggaaaacat 560

                                                                       
Query: 361 ataaagagattttacaatctcaaaacttaatttctatggtgttttttaacaaaggccggc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataaagagattttacaatctcaaaacttaatttctatggtgttttttaacaaaggccggc 620

                                                                       
Query: 421 aattcttagattcttgttctataactgctatttggcaagagccacttcagacaccatctg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aattcttagattcttgttctataactgctatttggcaagagccacttcagacaccatctg 680

                                                                       
Query: 481 cagtattactgcaggctcatcactgcaatgtctttcctcataaaactatgaatattggcg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagtattactgcaggctcatcactgcaatgtctttcctcataaaactatgaatattggcg 740

               
Query: 541 agta 544
           ||||
Sbjct: 741 agta 744


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space:   498756
Effective search space used:   498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)