Query= MSMg01no143_m09.b1 MSMg01no143_m09.b1 CHROMAT_FILE:
MSMg01no143_m09.b1 PHD_FILE: MSMg01no143_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:25 2005
(371 letters)
>mm_chr8_92462029_92462799
Length = 771
Score = 623 bits (322), Expect = 0.0
Identities = 322/322 (100%)
Strand = Plus / Minus
Query: 47 tctcagaccatctttggtgaaataactcatgcactttattccttgtggatttggtcttat 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 tctcagaccatctttggtgaaataactcatgcactttattccttgtggatttggtcttat 712
Query: 107 acacattttggggcagattggggtctaaaggcaaatgctttctattggcttgatctgaga 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 acacattttggggcagattggggtctaaaggcaaatgctttctattggcttgatctgaga 652
Query: 167 tgttagggatgcctcatctacatgaggaggggcttcaggtgttgccttgtgtgactgatt 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 tgttagggatgcctcatctacatgaggaggggcttcaggtgttgccttgtgtgactgatt 592
Query: 227 gttacagttctcttcatggggtgtcatggtcacatgtcccaggacaggaccctgatcaga 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gttacagttctcttcatggggtgtcatggtcacatgtcccaggacaggaccctgatcaga 532
Query: 287 agtagatttaaacacctactgttgtcagttatgagaacaactgggttttctgaatccaat 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 agtagatttaaacacctactgttgtcagttatgagaacaactgggttttctgaatccaat 472
Query: 347 agacctttccaagttttccgac 368
||||||||||||||||||||||
Sbjct: 471 agacctttccaagttttccgac 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_m09.g1 MSMg01no143_m09.g1 CHROMAT_FILE:
MSMg01no143_m09.g1 PHD_FILE: MSMg01no143_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:25 2005
(583 letters)
>mm_chr8_92347831_92348812
Length = 982
Score = 1064 bits (550), Expect = 0.0
Identities = 574/582 (98%), Gaps = 1/582 (0%)
Strand = Plus / Plus
Query: 1 catcaatcgagtaactagtggctcatctaaaaatatggagcgagacattcacttagcaat 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 catcaatcaagtaactagtggctcatctaaaaatatggagcgagacattcact-agcaat 259
Query: 61 atgagcttggacaaggcagatcttcctgctggacctcagctctgagcattacaggagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atgagcttggacaaggcagatcttcctgctggacctcagctctgagcattacaggagaga 319
Query: 121 atgtgtgtagagccagatgacaccccaatgttgactttgagtcacttctctttgtattct 180
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 320 atgtgtgtagagccagatgacaccccaatgttgactttgagtcgcttctatttgtattct 379
Query: 181 ttaaagtagaaaatgctcgtgtcatttaggcaatgcctctgcccatcagagagggagaga 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttaaagtagaaagtgctcgtgtcatttaggcaatgcctctgcccatcagagagggagaga 439
Query: 241 ctgtgtgtgttggggtgtagaaacaagatgggagaaacatcaaactaaacagacaagttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctgtgtgtgttggggtgtagaaacaagatgggagaaacatcaaactaaacagacaagttt 499
Query: 301 aaatgaaaggtactctgaaaaccgattatgtagtcgactgcccccacactaactggattc 360
||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 500 aaatgaaaggtactctgaaaaccgattatatagtcgactgcagccacactaactggattc 559
Query: 361 ctgagtgggaggctggagctgtaaaggagagaacggcgagagaagtaaagagaccaagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctgagtgggaggctggagctgtaaaggagagaacggcgagagaagtaaagagaccaagac 619
Query: 421 aaattttctgatcatggcccagagtttactaaaaatctgtgcttatataggcagaaagcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaattttctgatcatggcccagagtttactaaaaatctgtgcttatataggcagaaagcc 679
Query: 481 catctcccacagatccactcttgatgcctgttgccagcctgtaagcggctgtctgacagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 catctcccacagatccactcttgatgcctgttgccagcctgtaagcggctgtctgacagc 739
Query: 541 actggtttggcaagaaggtgtcaatcactaggttgcttgctg 582
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 actggtttggcaagaaggtgtcaatcactaggttgcttgctg 781
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 982
Length adjustment: 10
Effective length of query: 573
Effective length of database: 972
Effective search space: 556956
Effective search space used: 556956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
