NATTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTCTGAAATCTCGTGGTCTAGTAAAACTGAACTTCCTTCCATG
AAACAAATTCTGGACCCATGTCTTAGCAAATTAAAGATCTTTCCCCTGGA
TTAGGATGGCAACAGAACTGAAGCATAGATGATTGCTCTGCTCTGAGGGT
TTTGTTGAAAAGAGAGGGAAAGTTGCATTTTTGTTTAATTATATATAGTC
TCAGATCTTACATTATTTTTCTTTACAAAGAAACAGATGATGTGGACACA
GCTACTGTCTGGGGAAACCTTATGCACGTGATGGAGAGATACATCCATGG
TGGGAGCTCTTGGTCCTGCTTGAGGGAAAGTCAGCACTGGCATCTGGATC
CTTTGTCCTTTTTGACTCCCCCCCTAATTTCTATTATATTTCTGAAATTT
GCATCTTATAGATGATTTTTAGTTTCTCCTCTTCTCTCCTTGTCTCTTGT
CCTCCTTCCTTCACTCCGACCCTCCTTTTCTCATTCCCTCTCTCCTCCCC
TATGTCTATGAAATCAGATGTACTGCAGAAAAGAATATGCCTAATACAAA
ATTATTATGTGCCTTAATTTTTCAGGCCAAACAGAGAACTCCTCACACTT
CATCCTTATGAACTAAACACCTCCATCCTTTGAAGCTTATTAATGAGGCC
TTCATGGGTTTTTCACTTAACTC

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCTGAAGAATACCGAATGCCTGAG
AAGCACCTCAAAAAATGTTCAGCATCCTTAATCATCAGGGAAATGCAAAT
CAAAATAACCCTGAGATTCCACCTCACAGGTCAGAATGGCTAAGATCAAA
AATTCAGGTGACAGCAGATGCTGGCAAGGAAGTGTAGAAAGAGGAACACT
CCTCCATTGTTGGTGGGATTGCAAACTTGTACAACCACTCTGGAAATCAG
TCTGGAGGTTTCTCAGAAAATTGGACATAGTACTACCAGAGGATCCCACA
ATACCTCTCCTGGGCATATATCCAGAAGATGTTTCAACTGGTAAGAAGGA
CACATGCTAATACCCACAACGTGGAAAGAACCCAGATGCCTCTCATCAGA
GGAATGGATACAGAAAATGTGGTACATTTACACAATGGAGTACTACTCAG
CTATTAAAAAGAATGAATTCATGAAATTCTTAGGCAAATGGATGGACCTG
GAGGGTATCATCCTGGTAACCCAATCACAAAAGTACTCACAAGATATGTA
CTCACTGAAATGTGGATATTACCCTATAATTTCTCATAATATACATAAAA
CTTAATTTGAATATATCCACCAAATTATTTCCCTGTAATATCAGGATAAA
TATATTTCCATGATTCAGATAG

Query= MSMg01no144_f12.b1 MSMg01no144_f12.b1 CHROMAT_FILE:
MSMg01no144_f12.b1 PHD_FILE: MSMg01no144_f12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:09 2005
         (494 letters)



>mm_chr8_45620884_45621774
          Length = 891

 Score =  793 bits (410), Expect = 0.0
 Identities = 472/494 (95%), Gaps = 3/494 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctagtaaaactgaacttccttccatgaaacaaattctggacccatgtcttagcaaatta 60
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 598 tctagtaaaactgaacttccttccattaaacaaattctggacccatgtcttagcaaatta 539

                                                                       
Query: 61  aagatctttcccctggattaggatggcaacagaactgaagcatagatgattgctctgctc 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| 
Sbjct: 538 aagatctttcccctggattaggatggcaacagaactgaagcatagatgattgttctgctt 479

                                                                       
Query: 121 tgagggttttgttgaaaagagagggaaagttgcatttttgtttaattatatatagtctca 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 478 tgagggttttgttgaaaagagagggaaagttgcatttttgtttaattatatataatctca 419

                                                                       
Query: 181 gatcttacattatttttctttacaaagaaacagatgatgtggacacagctactgtctggg 240
           |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gatcttacattattttt---tacaaagaaacagatgatgtggacacagctactgtctggg 362

                                                                       
Query: 241 gaaaccttatgcacgtgatggagagatacatccatggtgggagctcttggtcctgcttga 300
            |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 361 aaaaccttatgcatgtgatggagagatacatccattgtgggagctcttggtcctgcttga 302

                                                                       
Query: 301 gggaaagtcagcactggcatctggatcctttgtcctttttgactccccccctaatttcta 360
            |||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||
Sbjct: 301 aggaaagtcagcactggcatctggatcctttgtcctttttgactctcaatctaatttcta 242

                                                                       
Query: 361 ttatatttctgaaatttgcatcttatagatgatttttagtttctcctcttctctccttgt 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 241 ttatatttctgaaatttgcatcttatagatgatttttagtttctcctcttctttccttgt 182

                                                                       
Query: 421 ctcttgtcctccttccttcactccgaccctccttttctcattccctctctcctcccctat 480
           ||||||||||||||||||| ||||  ||||||||||||||||| |||| |||||||||||
Sbjct: 181 ctcttgtcctccttccttccctccctccctccttttctcattctctctttcctcccctat 122

                         
Query: 481 gtctatgaaatcag 494
           | ||||||||||||
Sbjct: 121 gcctatgaaatcag 108


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 891
Length adjustment: 10
Effective length of query: 484
Effective length of database: 881
Effective search space:   426404
Effective search space used:   426404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)