Query= MSMg01no148_d14.b1 MSMg01no148_d14.b1 CHROMAT_FILE:
MSMg01no148_d14.b1 PHD_FILE: MSMg01no148_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:03 2005
(374 letters)
>mm_chr8_33174427_33175200
Length = 774
Score = 702 bits (363), Expect = 0.0
Identities = 369/371 (99%)
Strand = Plus / Plus
Query: 4 ggaattctttctaacattctccccatactcatgtcttgcatgaggacaggtacatgggta 63
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttctaacactatccccatactcatgtcttgcatgaggacaggtacatgggta 263
Query: 64 agggagaatgccctgaaatgtatgttctatttcagggagtaagctagtgccaccaggaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agggagaatgccctgaaatgtatgttctatttcagggagtaagctagtgccaccaggaaa 323
Query: 124 gagatgacaactcaagccagttgggattaagtgacaagaaagaccaaggaattagactaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gagatgacaactcaagccagttgggattaagtgacaagaaagaccaaggaattagactaa 383
Query: 184 acaaactggaagatctgagaggccatactcctgccaccaccatcactacgaagacaactc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acaaactggaagatctgagaggccatactcctgccaccaccatcactacgaagacaactc 443
Query: 244 cagtgattaccactccagccaccactgtgcctgttagtaccaccaccactgctactatca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cagtgattaccactccagccaccactgtgcctgttagtaccaccaccactgctactatca 503
Query: 304 cacaaacacacatgtgcacatgcacacacacacacacacacactcacacacacacacata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cacaaacacacatgtgcacatgcacacacacacacacacacactcacacacacacacata 563
Query: 364 cacacatgcac 374
|||||||||||
Sbjct: 564 cacacatgcac 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_d14.g1 MSMg01no148_d14.g1 CHROMAT_FILE:
MSMg01no148_d14.g1 PHD_FILE: MSMg01no148_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:03 2005
(325 letters)
>mm_chr8_33265292_33266017
Length = 726
Score = 623 bits (322), Expect = 0.0
Identities = 325/326 (99%), Gaps = 1/326 (0%)
Strand = Plus / Minus
Query: 1 ttcagacccatgcatcagaatcaaatggatgagactgcaattagtttccttgttgttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ttcagacccatgcatcagaatcaaatggatgagactgcaattagtttccttgttgttgtt 467
Query: 61 gctgggtttaattgttttcaaggaaagttgttattcctaagattatagccaatgctttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gctgggtttaattgttttcaaggaaagttgttattcctaagattatagccaatgctttaa 407
Query: 121 aacaagaaagtctgactataaggagccgtgcctttgtcccagacaaatgtttatcttttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aacaagaaagtctgactataaggagccgtgcctttgtcccagacaaatgtttatcttttt 347
Query: 181 tgctctctggtgtaccttttttttt-ggggggggggtggctagtgataatgagtgatagt 239
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 346 tgctctctggtgtaccttttttttttggggggggggtggctagtgataatgagtgatagt 287
Query: 240 gtcttaagatattttatatattaaaaagtatagatgcttttgctttttcattgcttataa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gtcttaagatattttatatattaaaaagtatagatgcttttgctttttcattgcttataa 227
Query: 300 ctacttctgagtcataaataaatagt 325
||||||||||||||||||||||||||
Sbjct: 226 ctacttctgagtcataaataaatagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 726
Length adjustment: 9
Effective length of query: 316
Effective length of database: 717
Effective search space: 226572
Effective search space used: 226572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
