Query= MSMg01no149_e16.b1 MSMg01no149_e16.b1 CHROMAT_FILE:
MSMg01no149_e16.b1 PHD_FILE: MSMg01no149_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:30 2005
(360 letters)
>mm_chr8_130733356_130734115
Length = 760
Score = 569 bits (294), Expect = e-166
Identities = 342/370 (92%), Gaps = 20/370 (5%)
Strand = Plus / Plus
Query: 1 gatgccataaattggatattgttcctaaactgagaacttgcaaatcagcctcatgccaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 gatgccataaattggatattgttcctaaactgagaacttgcaaatcagccacatgccaaa 260
Query: 61 catcaaacaatcagagagaagtaagagaagcttttagctttcaagccatgtccatgactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catcaaacaatcagagagaagtaagagaagcttttagctttcaagccatgtccatgactg 320
Query: 121 agaaacccaaggctaagctctatcaagacttgagtcctccaaattgttcccaagtcttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaacccaaggctaagctctatcaagacttgagtcctccaaattgttcccaagtcttag 380
Query: 181 ccttctgatcttctgctccagatctctcttgctctgtctctctgtctctgtctctctgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccttctgatcttctgctccagatctctcttgctctgtctctctgtctctgtctctctgtc 440
Query: 241 tctgtctctctgtctctgtctgtctgtctgtctttctctctctctcacacacacacacac 300
||||||| |||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 441 tctgtct----------gtctgtctgtctctctctctctctctctcacacacacacacac 490
Query: 301 acagagaga----------gagagagagagagagagagagagagagctttatgtcttgtt 350
||| | | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 491 acacacacacacacacacagagagagagagagagagagagagagagctttatgtcttggg 550
Query: 351 acaacttggt 360
||||||||||
Sbjct: 551 acaacttggt 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 760
Length adjustment: 9
Effective length of query: 351
Effective length of database: 751
Effective search space: 263601
Effective search space used: 263601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_e16.g1 MSMg01no149_e16.g1 CHROMAT_FILE:
MSMg01no149_e16.g1 PHD_FILE: MSMg01no149_e16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:30 2005
(503 letters)
>mm_chr8_130892546_130893448
Length = 903
Score = 915 bits (473), Expect = 0.0
Identities = 493/503 (98%), Gaps = 6/503 (1%)
Strand = Plus / Minus
Query: 1 actggacagctactcttgtcaaactggtgagttacagattcaacttgaaagagagcctac 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 671 actggacagctactcttgtcaaactggtgagttacaggttcaacttgaaagagagcctac 612
Query: 61 ctctaaaccataaggtggagagttgctgaggaagtcacccaacaatcatgttttgttttg 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 611 ctctaaaccataaggtggagagttgctgaggaagtcacccaacaatcatggtttgttttg 552
Query: 121 ttttgttttcagcatggacatacctctcccagcctcaagacaaacacgggaagaattttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ttttgttttcagcatggacatacctctcccagcctcaagacaaacacgggaagaattttc 492
Query: 181 tgaattccctttgcatagaaagtagatccagatgggagactttgtgtttgttataaggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tgaattccctttgcatagaaagtagatccagatgggagactttgtgtttgttataaggta 432
Query: 241 cctgttaacatattaagtaaagataagatatttctacattagccactgggaaaaatgagc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 431 cctgttaacatattaagtaaagataagatatttctacattagccactgggaaaaataagc 372
Query: 301 tgagttttcagcaggacaggactccttatcagaagggaaagagtgtgtctttgtgtaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tgagttttcagcaggacaggactccttatcagaagggaaagagtgtgtctttgtgtaagt 312
Query: 361 gtgaatgtcaatgtctctgcaaggccatgtctgcatgtgtgcatgatgcctgtgtgtatg 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 311 gtgaatgtcaatgtctctgcaaggccatgtctgcgtgtgtgcatgatgcctgtgtgtatg 252
Query: 421 tgtgcccatgtctgagtgctgcatgtctatgtgtgtatgcacgtctgtgtctgtgtctgt 480
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 251 tgtgcccatgtctgagtgctgcatgtctatgtgtgtatgcac------gtctgtgtctgt 198
Query: 481 gtcaataattgtgtgcatgcccg 503
|||||||||||||||||||||||
Sbjct: 197 gtcaataattgtgtgcatgcccg 175
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
