Query= MSMg01no149_e18.b1 MSMg01no149_e18.b1 CHROMAT_FILE:
MSMg01no149_e18.b1 PHD_FILE: MSMg01no149_e18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:31 2005
(552 letters)
>mm_chr8_17394836_17395788
Length = 953
Score = 978 bits (506), Expect = 0.0
Identities = 539/550 (98%), Gaps = 1/550 (0%)
Strand = Plus / Plus
Query: 4 gaattctctctc-ttactttaagaatctgcatccatgaaccactcaaaaaagcaaatgaa 62
|||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctctctcagtaatttaggaatctgcatccatgaaccactcaaaaaagcaaatgaa 263
Query: 63 atccataactgctattcttttggcagaggagggagagagaagcagtgaattcagtctgat 122
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 264 atccataactgctattcttttggcagaggagagagcgagaagcagtgaattcagtctgat 323
Query: 123 caatgctgtgcttgagatcctgacaaaacatgtggacatgtagtctaggtaagggttaaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caatgctgtgcttgagatcctgacaaaacatgtggacatgtagtctaggtaagggttaaa 383
Query: 183 caccatagttcaagtaagggttaaacaccagagcctggttaagcttgacagaaccaactg 242
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 catcatagttcaagtaagggttaaacaccagagcctggttaagcttgacagaaccaactg 443
Query: 243 aatttggcatcataaattatatccttgctattttggacacacacaaaaagctgattttcc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatttggcatcataaattatatccttgctattttggacacacacaaaaagctgattttcc 503
Query: 303 aagatgacaggatttgactaaacttgcatgagtttacatagaacagagttatcttttctt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aagatgacaggatttgactaaacttgcatgagtttacatagaacagagttatcttttctt 563
Query: 363 tcagtggccgcagtccacttcctctgtttctgatacctgttcattattccaatattggcc 422
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 564 tcagtggccgcagtccacttcctttgtttctgatacctgttcattattccaatattagcc 623
Query: 423 aagtatctcccaagcggtagcagatgggctcaactatagctgaaagcagagtgactctca 482
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aagtatctcccaagctgtagcagatgggctcaactatagctgaaagcagagtgactctca 683
Query: 483 cctgcaagctctggcaggaattcagacacccagacagtcacagtttgacctggtgtgcac 542
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cctgcacgctctggcaggaattcagacacccagacagtcacagtttgacctggtgtgcac 743
Query: 543 tggaatcacc 552
||||||||||
Sbjct: 744 tggaatcacc 753
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 953
Length adjustment: 10
Effective length of query: 542
Effective length of database: 943
Effective search space: 511106
Effective search space used: 511106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_e18.g1 MSMg01no149_e18.g1 CHROMAT_FILE:
MSMg01no149_e18.g1 PHD_FILE: MSMg01no149_e18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:31 2005
(522 letters)
>mm_chr8_17571950_17572871
Length = 922
Score = 994 bits (514), Expect = 0.0
Identities = 520/522 (99%)
Strand = Plus / Minus
Query: 1 acctcatagggccaactgaaactaacttctcctggtgttgataagtctttacccataaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 acctcatagggccaactgaaactaacttctcctggtgttgataagtctttacccataaga 663
Query: 61 ctgcaagatgctaaaaatgtcatgaaaatcaggacaatgtgccaaggaatttcagagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ctgcaagatgctaaaaatgtcatgaaaatcaggacaatgtgccaaggaatttcagagcag 603
Query: 121 tgatttgacgttataaacaattccccatctttcctgatctcctaagttcttttagaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tgatttgacgttataaacaattccccatctttcctgatctcctaagttcttttagaaata 543
Query: 181 gaactctagatgacaaagtccctttaaaagtatctgtgtctacttccagagtcagaaaaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 542 gaactctagatgacaaagtccctttaaaagtatctgtgtctacttccagaatcagaaaaa 483
Query: 241 caaagaaaggttggctgaggtgaactgaaggagaaatagatctgaaacccatttggtagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 caaagaaaggttggctgaggtgaactgaaggagaaatagatctgaaacccatttggtagc 423
Query: 301 aattactctgcggctttctttctcaatgccaactattgtagagtagatttctttctgctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aattactctgcggctttctttctcaatgccaactattgtagagtagatttctttctgctt 363
Query: 361 gctttttctgaactgaaagatgcaggtcattggaggatgtgtctagagaaagataaaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gctttttctgaactgaaagatgcaggtcattggaggatgtgtctagagaaagataaaata 303
Query: 421 taattttgatttcttcaaatatatataaagtcctaaacaacttcagggggttccatattg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 taattttgatttcttcaaatatatataaagtcctaaacaacttcagggggttccatattg 243
Query: 481 gaaggatgtaaccaggcgattccttgctgcctcattgcacat 522
||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 242 gaaggatgtaaccaggcgattccttgctgcctcattgtacat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
