NAAACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTTATGTTTACCATTGCCCAATGAGTCTAGCTCAGGCTCTT
TGACATTATTGTTCATGCCACCATCATCAACACCATTGTACTCATCACAA
TTGGAGACATCATCACCTTCATCAACAACCATATCTATAGCAGCAGGAAC
AATGGATAAATTAGCCATCATACCCACAGCTACAATAACAAATAAACCAA
GAGGAAAGTATATTGGTGACTTACCCTACCACACTTTGGATGGATTCCAA
CCAGGGTACTGGGACCATGAACACTTTATCCTAAACCTCACAACACCAGG
AATGCATTCTATCTCAATATGCTCTTTGTGAAGCTATTGAGAATATAGTT
TGGTGCAGCTATTGTGATAACTGGAGAAAAGCCAAGGCCGATTTTGTACC
AATTTTGAGAGCCATAGACACCAATGATGAAGAGGAAAGTGAAAACACCA
ATTTTAAGGAAAGAATTCCACTGAAATACCATTCAACACAGAATTGAAGA
AATATCACAGCAGCATTAGCCATCTACACTTCCCAGTTAGAAAGAAATAT
CTCCTAAATCATCCTTTCACCTTACAATGAAGAGCAAGGTGAGAATAAGA
TTAAGATCCCAGGCATAGAAAACTCCTTGTGTGAAATAT

TTTTCCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGGGTATAGCGGTTAAGAGCA
TCACCCCTTCAGGAATGAGTTTTGGAAGACATAGCTCCTGTAAGAAACCC
AAATAAATTCATTGGCTAACAAAGCTGGATTTGGGTGGAAGTCTCTCTCT
CCCTCTCTCTCCCTCTCGATCTCATCCTTCATTTTTTTTTTNNCCCACCC
CCTCTCCTCCTCCCTCTTCTCCTTTCTCTTTTCACCCCCCCTACCCCGAC
CCCCCTCTTTCTTTTCTCATTCCACCCTTTCTTTACCCTCATCTCCCCTT
CACCTTCTCTTCTCCCTTTCCTATACCCCTTTTTCCTTCTTCCTTTCACC
TTACCCTTTCCCCATCATCACTATTATTAATTCATTACTCACCCCCTCCC
TTTCCCCTCATTTTATCTCATTTCATTATCCTTATCTCTTCTTTATCCCT
TTTACTCTCCTTTCACTTTTATCTAACCCTTATATCCCTGTACCCCTTAT
TATATCTTATTCTCCCTATTTACCACTTTTCCCCTTTTACTACCCAACTC
CCATTCACTGTATTTTTACCTTTGTTTTCCCTTTTTCCCTTTTATCCCTC
TTTTCTCACATACCCCTATCACAATAATTATTCCCTTATATATTCCCCAT
TTTCCCCATTTTCTCCCCCCCTCTT

Query= MSMg01no149_i02.b1 MSMg01no149_i02.b1 CHROMAT_FILE:
MSMg01no149_i02.b1 PHD_FILE: MSMg01no149_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:48 2005
         (571 letters)



>mm_chr8_54584343_54585311
          Length = 969

 Score = 1038 bits (537), Expect = 0.0
 Identities = 559/567 (98%), Gaps = 2/567 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttatgtttaccattgcccaatgagtctagctcaggctctttgacattattgtt 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 gaattctttatgtttagcattgcccaatgagtctagctcaggctctttgacattattgtt 710

                                                                       
Query: 65  catgccaccatcatcaacaccattgtactcatcacaattggagacatcatcaccttcatc 124
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 aatgccaccatcatcaacaccattgtactcatcacaattggagacatcatcaccttcatc 650

                                                                       
Query: 125 aacaaccatatctatagcagcaggaacaatggataaattagccatcatacccacagctac 184
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 aacaaccatatctatagcatcaggaacaatggataaattagccatcatacccacagctac 590

                                                                       
Query: 185 aataacaaataaaccaagaggaaagtatattggtgacttaccctaccacactttggatgg 244
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 589 aataacaaataaaccaagaggaaagtatattggtgacttaccctatcacactttggatgg 530

                                                                       
Query: 245 attccaaccagggtactgggaccatgaacactttatcctaaacctcacaacaccaggaat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 attccaaccagggtactgggaccatgaacactttatcctaaacctcacaacaccaggaat 470

                                                                       
Query: 305 gcattctatctcaatatgctctttgtgaagctattgagaatatagtttggtgcagctatt 364
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 469 gcattctatctcaatatgctctttgtgaagctattgagaatacagtttggtgcagctatt 410

                                                                       
Query: 365 gtgataactggagaaaagccaaggccgattttgtaccaattttgagagccatagacacca 424
           |||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||
Sbjct: 409 gtgataactggagaaaagccaatgccgattttgtaccaattttgagagcca--gacacca 352

                                                                       
Query: 425 atgatgaagaggaaagtgaaaacaccaattttaaggaaagaattccactgaaataccatt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atgatgaagaggaaagtgaaaacaccaattttaaggaaagaattccactgaaataccatt 292

                                                                       
Query: 485 caacacagaattgaagaaatatcacagcagcattagccatctacacttcccagttagaaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 caacacagaattgaagaaatatcacagcagcattagccatctacacttcccagttagaaa 232

                                      
Query: 545 gaaatatctcctaaatcatcctttcac 571
           |||||||||||||||||||||||||||
Sbjct: 231 gaaatatctcctaaatcatcctttcac 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 969
Length adjustment: 10
Effective length of query: 561
Effective length of database: 959
Effective search space:   537999
Effective search space used:   537999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)