CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGGA
ATTCCCTCTCCACCCGAATTCGCCCTAAAGGTAAGAACAAGAAAACATCA
GAGCAGAGGAGTAACATTCAACAGACAACTGAAGATTTTCTTCTGTAAAT
AAATAAATTACCCATACACACAAATAAATAAATAAATAAATTACCCATAC
ACACAAATAAATAAATAAATAAATTACCCATACACACAAATAAATAAATA
AATAAATTACCCATACACACAAATAAATAAATAAATAAATTACCCATTCA
TGACCAAGTTGGTGTAAACAAGGCCACAGGAAGTTTTCTATGGCTTAAAG
ACATCCGCCCACAAGTATGAAAAGGAGTGCCTGAGAGGAACTCACAAAGC
TCTGGACCGTCAAATCCCACCCCCTTATGCATCAGACCCACGTGATCTGT
GCAAGTTTCTCTCTCTTGATGACTGTGAAGGCGGACCAGGATGACAGCAG
CAGAGCCTGTGGCATTAACTTAGCTCTTTGTGGTTTCTCTTTAACCTTCC
TCCTGGGCACCCAGGAATCTGGCCAGAGTGGACATAGTGTCAAAGAACTG
GGATGTTGCTCTCTGCATTATGTCATGGTCATCTCAACCAAAGGAGACAG
GAAACTGTTGGTTGTAGGATACCATATTAACCAGATGCCAAATGTGTCCA
GTCATCAGTAAAATCTCACAGCCCTTGTATAGCTT

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAGCAGAAGATGGAACAGAAAAAGGCC
TTCTAGATATAATGGAGGCAGTACTCATATGAACTCAGACTGTGACAGCA
CGCACTGGTCCTACACAGGTCTAGGCCAGATGAGATCCTAATACTAGAGA
GGAAATGGACAAAAACCCTCCTCTCTAAGTCAGAAGCTACCTGCAGTTGG
TAACCACTCACAAACAAAACAAATTAGTTTTCTCCAATGGAGTCTTACTG
GGTATATAAACCACACTTAAGGGCAGGCCTGAGGCCTGCAGTAGATGGCC
AACACACAAAAACTGAGTGATAATTTTGGAGTGATTGTTTTCTTTGTTTG
TTTGCTTTGTCTGACCCCCCCCTTGTCNNGNGNNTTGNTTTTAAAAAATT
ATAGGTCTTTTGAATATAAATTATGGTTTATTTGTTTTTTTATTTAAGTT
TTATTATTTGACTTTTTTGTTTATTTTCACACCTCCCCCCCCCCTTTTTA
CCCCCCTCTTCTTCTTAGCCCTTTTTTTTTTTCCCCTTCACCTTTTTCAC
TTCTGCTCTCTTTTATCCGTTTTACCCTTAATTTCTTCCCTTTTGTTTTT
TCCTTCTTTTTCCTCCTCTCTTTTCCTCCCTTGCTTTCCTTTTCTTCTTA
CAATTTGACCTCTTTTACCTTTTATCTACCTCCTTCTTATCTTACCCTTT
TATTCTTCTG

Query= MSMg01no151_l18.b1 MSMg01no151_l18.b1 CHROMAT_FILE:
MSMg01no151_l18.b1 PHD_FILE: MSMg01no151_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:37 2005
         (579 letters)



>mm_chr8_81570245_81571224
          Length = 980

 Score =  870 bits (450), Expect = 0.0
 Identities = 500/532 (93%), Gaps = 29/532 (5%)
 Strand = Plus / Minus

                                                                       
Query: 72  cattcaacagacaactgaagattttcttctgtaaataaataaattacccatacacacaaa 131
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 cattcaacagacaactgaagattttcttctgtaaataaataaattacccatacacacaaa 921

                                                                       
Query: 132 taaataaataaataaattacccatacacacaaataaataaataaataaattacccataca 191
           |||||||||||||||||||||||||||||||||||||||||||||||     ||||||||
Sbjct: 920 taaataaataaataaattacccatacacacaaataaataaataaata----gcccataca 865

                                                                       
Query: 192 cacaaataaataaataaataaattacccatacacac------------aaataaataaat 239
           ||||||||||||||||||||||||||||||||||||            ||||||||||||
Sbjct: 864 cacaaataaataaataaataaattacccatacacacaaataaataaataaataaataaat 805

                                                                       
Query: 240 aaataaattaccca----------ttcatgaccaagttggtgtaaacaaggccacaggaa 289
           ||||||||||||||          ||||||||||||||||||||||||||||||||||||
Sbjct: 804 aaataaattacccatacacacaacttcatgaccaagttggtgtaaacaaggccacaggaa 745

                                                                       
Query: 290 gttttctatggc-ttaaagacatccgcccacaagtatgaaaaggagtgcctgagaggaac 348
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gttttctatggctttaaagacatccgcccacaagtatgaaaaggagtgcctgagaggaac 685

                                                                       
Query: 349 tcacaaagctctggaccgtcaaatcccacccccttatgcatcagacccacgtgatctgtg 408
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 684 tcacaaagctctggaccgtcaaatcccagccccttatgcatcagacccacgtgatctgtg 625

                                                                       
Query: 409 caagtttctctctcttgatgactgtgaaggcggaccagga-tgacagcagcagagcctgt 467
           ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 624 caagtttctctctcttgatgactgtgaaggcggacca-gattgacagcagcagagcctgt 566

                                                                       
Query: 468 ggcattaacttagctctttgtggtttctctttaaccttcctcctgggcacccaggaatct 527
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggcattaacatagctctttgtggtttctctttaaccttcctcctgggcacccaggaatct 506

                                                               
Query: 528 ggccagagtggacatagtgtcaaagaactgggatgttgctctctgcattatg 579
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggccagagtggacatagtgtcaaagaactgggatgttgctctctgcattatg 454


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 92
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 980
Length adjustment: 10
Effective length of query: 569
Effective length of database: 970
Effective search space:   551930
Effective search space used:   551930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)