Query= MSMg01no152_p14.b1 MSMg01no152_p14.b1 CHROMAT_FILE:
MSMg01no152_p14.b1 PHD_FILE: MSMg01no152_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:14 2005
(352 letters)
>mm_chr8_64875010_64875762
Length = 753
Score = 605 bits (313), Expect = e-177
Identities = 341/353 (96%), Gaps = 7/353 (1%)
Strand = Plus / Minus
Query: 5 gaattccttaaac---tcccaggaatccagtgggaaataaaacatgaaaaattaagtcgt 61
||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 475 gaattccttaaacacat--caggaatccagtgggaaataaaacatgaaaaattaagtctt 418
Query: 62 aattgaatttatatcatatttgagggatagagacaattggcagatgaagaaacaaaagca 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aattgaatttatatcatatttgagggatagagacaattggcagatgaagaaacaaaagca 358
Query: 122 tatttaaattaatgttaagagaactggataaacacttcagtggggtataaattcagcaat 181
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 357 tatttaaattaatgttaagagaactggataaacacttcagtggtatataaattcagcaat 298
Query: 182 attttgaaaaactactgtttgaaataaagtcactgaggggcagttcactgaaatataaaa 241
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 attttggaaaactactgtttgaaataaagtcactgaggggcagttcactgaaatataaaa 238
Query: 242 atttgcttaatcttttaaaagctgtaagccaaagtgtgtgtgtgtgtgtgtgtgtgtgtg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 atttgcttaatcttttaaaagctgtaagccaaagtgtgtgtgtgtgtgtgtgtgtgtgtg 178
Query: 302 tgtgtgtgtgtgtgtg--acatgcctgtgcatccacattacgatcacaattta 352
|||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 177 tgtgtgtgtgtgtgtgtcacatgcctgtgcatccacattacaatcacaattta 125
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 753
Length adjustment: 9
Effective length of query: 343
Effective length of database: 744
Effective search space: 255192
Effective search space used: 255192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no152_p14.g1 MSMg01no152_p14.g1 CHROMAT_FILE:
MSMg01no152_p14.g1 PHD_FILE: MSMg01no152_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:14 2005
(608 letters)
>mm_chr8_64749638_64750645
Length = 1008
Score = 1137 bits (588), Expect = 0.0
Identities = 599/604 (99%), Gaps = 3/604 (0%)
Strand = Plus / Plus
Query: 1 tttgactactgtacaatttgtaattgttggtggaagtagttataagtcagtgctcacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgactactgtacaatttgtaattgttggtggaagtagttataagtcagtgctcacatc 260
Query: 61 tgttctattagtctctgtgtcccaagcaccagtaagaatagatacagtgccttttgtgtt 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 tgttctattagtctctgtgtcccaagcaccagtaagaacagatacagtgccttttgtgtt 320
Query: 121 aaactcctctcagaagcctaaacctgtactttgttccctgcagttaagatttgtttaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaactcctctcagaagcctaaacctgtactttgttccctgcagttaagatttgtttaaaa 380
Query: 181 aaagcctgaaatgtaatttatattgacctagggatatttcagttatagggcatagttaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagcctgaaatgtaatttatattgacctagggatatttcagttatagggcatagttaac 440
Query: 241 aaaatgaaatatgcagaaagtgttggtataaatattttaacatatatttatttatttatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaatgaaatatgcagaaagtgttggtataaatattttaacatatatttatttatttatt 500
Query: 301 atttatttaattttttcttgagacagactttctctgagtaacagtccttgctgccctgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttatttaattttttcttgagacagactttctctgagtaacagtccttgctgccctgaa 560
Query: 361 actcagtttgtaggtcaggctgccctcaaactcacagagatctccctgcctttcaagtgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actcagtttgtaggtcaggctgccctcaaactcacagagatctccctgcctttcaagtgc 620
Query: 421 tgggattaaaggtgtgtgtcaccactgcccagcttaaattgttttaattaatataaaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgggattaaaggtgtgtgtcaccactgcccagcttaaattgttttaattaatataaaact 680
Query: 481 tcatcatttttcctctcctctactgtcccacctcctacccctagactccctctcaaattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcatcatttttcctctcctctactgtcccacctcctacccctagactccctctcaaattc 740
Query: 541 atggtctcttttatacacacaccaccactaccaccactaccaccataatcaccactacca 600
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 741 atggtctcttttatacacacaccaccactaccaccactaccaccac---caccactacca 797
Query: 601 ccac 604
||||
Sbjct: 798 ccac 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
