CAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCTCCCAGATGCTTCCTGTTAGAACTTCTGTGTTTGTCTATCAGCAGAC
CTGGGAGACAGATTCTCTCCTCTTAGTTTCAGTGCTCAGAGCACTCTCTG
CTGGCAAGCTCTCTTACAGGGAAGGTGCGCACATATCTTGTGTTTGGACC
TCCTCCTGGCCGAAGAAGGCGCAAAACAGGACCTTTCTCAGAAGCTGTGT
TGCTTTGGCAGGTCCCAGAAGCTGTCAGCTTCTGTGGTGCAGACTCTCAC
CTGTGCAGACTAAATTCCTAAGTTCCAGGGAGTCCTGGAACCAAGATGGC
GCCCGCTACTCCTGAGGCTGAGGCCGCCTCCCGAGCCAGGCGGACACCTG
TCCTCTGGTCCAGACGGTGGACGGCTCCCTTCTGTGTTTGTATTCCTCTG
TTTTGTGTAAGAATCCAGTAACCTCTTTGTACCTTGTTGGGGTGTCACCC
AACTTCCCTATTTTCTTCTGTATAAAAAGTTTGATGCTCGATTTAACAAA
TTACATTCAGATTCTACACAACCTCTCCTGTGTGCATCTGTCTGTCATTC
CATCCAAAGCTTTTGCCACCTGCAACTAGAGACCCGGTCCACGCAGACAA
AGGGGCCCAGAGGGTCTGCGGCAGAAAGTGAACTTATA

CATTGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCAGGATCCATAGTTTAATATTCAGTA
GTTTTAGAAAATGCATGGCCATTATCCCCTCTGATATTCCATTGGCCATA
CATTTACTTTTGCTACCGAGGTACCTGGTGCAGATTGTTGCTCTACATAT
CTCCTGTGCTTTCTCCAGCATGTGATTGTTAGTGTTGCCTCTTCTCAGGT
TCTAATTTTCTGAGAATTTTGTTAAAGAAAAATTTTTTACTTTTAATGTT
TTATTTTTAAATGCACCTTAGTTACTGTTTTCCCAATTTTAAAATTCCAA
ACTATATAAATAAATCAGAAAGTATAACATAGTTCATACTATATAAATGT
GATAGACGATATGCATCATGAAGATATTTATTATTTATTTAATTTAGAAT
TGTAAAAGTTGTATTCAACCATGCACATTCACATTTACTATGATGATACG
AATAATATTTTTCAAAACTGATACTTACAAGAGGCAGGCTTAGTGAAGGG
ATTAATTGCTCAGCTAAATGTCACACAGAGAAGGTAGGACGTGGAACAAA
TCAATATAACACTGATTTCGCTTGCACTTCAAACACTGGCATGAAGTATA
TTTTTTGAGTTGTCTTATTTTTTTTCCATTTAAATTGCCAGAAG

Query= MSMg01no154_a03.g1 MSMg01no154_a03.g1 CHROMAT_FILE:
MSMg01no154_a03.g1 PHD_FILE: MSMg01no154_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:31 2005
         (543 letters)



>mm_chr8_41070906_41071848
          Length = 943

 Score = 1035 bits (535), Expect = 0.0
 Identities = 541/543 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   caggatccatagtttaatattcagtagttttagaaaatgcatggccattatcccctctga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 caggatccatagtttaatattcagtagttttagaaaatgcatggccattatcccctctga 728

                                                                       
Query: 61  tattccattggccatacatttacttttgctaccgaggtacctggtgcagattgttgctct 120
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 727 tattccattggccatacatttacttttgctactgaggtacctggtgcagattgttgctct 668

                                                                       
Query: 121 acatatctcctgtgctttctccagcatgtgattgttagtgttgcctcttctcaggttcta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 acatatctcctgtgctttctccagcatgtgattgttagtgttgcctcttctcaggttcta 608

                                                                       
Query: 181 attttctgagaattttgttaaagaaaaattttttacttttaatgttttatttttaaatgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 attttctgagaattttgttaaagaaaaattttttacttttaatgttttatttttaaatgc 548

                                                                       
Query: 241 accttagttactgttttcccaattttaaaattccaaactatataaataaatcagaaagta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 accttagttactgttttcccaattttaaaattccaaactatataaataaatcagaaagta 488

                                                                       
Query: 301 taacatagttcatactatataaatgtgatagacgatatgcatcatgaagatatttattat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 taacatagttcatactatataaatgtgatagacgatatgcatcatgaagatatttattat 428

                                                                       
Query: 361 ttatttaatttagaattgtaaaagttgtattcaaccatgcacattcacatttactatgat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ttatttaatttagaattgtaaaagttgtattcaaccatgcacattcacatttactatgat 368

                                                                       
Query: 421 gatacgaataatatttttcaaaactgatacttacaagaggcaggcttagtgaagggatta 480
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 367 gatacgaataatatttttcaaaactgaaacttacaagaggcaggcttagtgaagggatta 308

                                                                       
Query: 481 attgctcagctaaatgtcacacagagaaggtaggacgtggaacaaatcaatataacactg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 attgctcagctaaatgtcacacagagaaggtaggacgtggaacaaatcaatataacactg 248

              
Query: 541 att 543
           |||
Sbjct: 247 att 245


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space:   497289
Effective search space used:   497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)