XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTA
TCCCCTTCAGGGGCTTATAATCTTTGCTCCTGTTCTTCCATAAGAGTCCT
CAAGCTTTATCCACTGTTTGGCTCTGGGTTTTTGTATCTGTCTGAGTCAG
CTGCTGCATGGAGCCTCTCAGAGAACAGTCATGCTAGGCTCTTGTTTCCA
AACATAAAGGAGTATCATTAATAGTGTTAGAGATTGGAGGTTGCCAATGG
GACCAATCCCTGATACAATTAAGGACACAGACCAGATCCAGATCTTGACA
AGTAATGGCCAAGAAAAGCTTAGTTCCAGGCATGGTAGTACATACCTTTA
ATACAAGGAGACAGAGACAAGCATATCTCTGAGATCAAGGCCAGCCTAGG
ACAGAGCAAGTTCTAGGGGAAGAAAAACTTAAATTCAAGCTTGGTGGTAC
ACACATCCCAGCATTCAGAAGTCAGAGTCATGAAAATCTCTCTGTTCATG
GTCAATCTACAAAGCAAATTCTAGGACAGCCAAATTTAGACATTGAATGA
TTTGGAAATAGAAACATGATAAAAATGTAAAAGAACAATTGGGTCATGTT
CCAGTTCCAACAAGCAGCAGAACAGCTTTGGTCATGTGGCTCTGGCTTTA
AAGTCAAGAATGAAAGAGACTATTGGTACTATTGATGCTGGTAAGTTGGC
GCTAAGAAATATGTGGTATTTAAGAAGAAACTAACATCN

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTGTCTTCTTCTTTCTGTTAAATGTCTCTGTATT
CCTGAATGACATTTGCACTGTAACAGAGGATAAGAGGTAGGGATCATTAA
ACTAGGACAGTGATTCTCAACCTCCCTAATGCTGTGAGCCAACAATATAG
TTCCTCTTGTTGTGGTAACTCTCAACCATAATATTAGTTTGTTGCTACTT
CATAACTGTATTGCTACTGTTATGAATCAAAATATAAGTATCTGATATGC
ATAATCTCTAATATGTGACACCTATGAATGGCTCCTTTGATCAATCATAC
GGGCTGTAACCTACAGGTTGAGAACAGCTGATCTAGGGACTTTAGTGTTT
AGGGATGATAGGTTCTCTAGGTCCTCTTTCACCTTATACTTCCTATACTC
AGAGCTGGAAATCCAGATATCATGCCAACACAAGCTATCTCCTCTATCCA
TAATTGGGAGAGGGATGTCCTTTTAATAGTAAAGAGAGAAAAAAAAAAAG
AAGACAGCAATAGCAGGGATTATGCCAAATGTTGATTCTGTGATTTCAAC
TATGGCCATTTTAGTTAATGTCCAATGGGGAGTCCAAACTACTGTCTATT
TCATACACTGTGATAAGGCATCTAGTCTACCATCTATAAAGAAGGCACAA
TAGTGAGTAGGAACTCTCTTCCATTGAGGATAGTAAA

Query= MSMg01no157_b24.g1 MSMg01no157_b24.g1 CHROMAT_FILE:
MSMg01no157_b24.g1 PHD_FILE: MSMg01no157_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:25 2005
         (657 letters)



>mm_chr8_62548079_62549134
          Length = 1056

 Score = 1021 bits (528), Expect = 0.0
 Identities = 540/544 (99%), Gaps = 1/544 (0%)
 Strand = Plus / Minus

                                                                        
Query: 114  gctgtgagccaacaatatagttcctcttgttgtggtaactctcaaccataatattagttt 173
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 gctgtgagccaacaatatagttcctcttgttgtggtaactctcaaccataatattagttt 997

                                                                        
Query: 174  gttgctacttcataactgtattgctactgttatgaatcaaaatataagtatctgatatgc 233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996  gttgctacttcataactgtattgctactgttatgaatcaaaatataagtatctgatatgc 937

                                                                        
Query: 234  ataatctctaatatgtgacacctatgaatggctcctttgatcaatcatacgggctgtaac 293
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936  ataatctctaatatgtgacacctatgaatggctcctttgatcaatcatacgggctgtaac 877

                                                                        
Query: 294  ctacaggttgagaacagctgatctagggactttagtgtttagggatgataggttctctag 353
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876  ctacaggttgagaacagctgatctagggactttagtgtttagggatgataggttctctag 817

                                                                        
Query: 354  gtcctctttcaccttatacttcctatactcagagctggaaatccagatatcatgccaaca 413
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816  gtcctctttcaccttatacttcctatactcagagctggaaatccagatatcatgccaaca 757

                                                                        
Query: 414  caagctatctcctctatccataattgggagagggatgtccttttaatagtaaagagagaa 473
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 756  caagctatctcctctatccataattgggagagggatgtccttttaatagtaaagaga-aa 698

                                                                        
Query: 474  aaaaaaaaagaagacagcaatagcagggattatgccaaatgttgattctgtgatttcaac 533
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697  aaaaaaagagaagacagcaatagcagggattatgccaaatgttgattctgtgatttcaac 638

                                                                        
Query: 534  tatggccattttagttaatgtccaatggggagtccaaactactgtctatttcatacactg 593
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 637  tatggccattttagttaatgtccaatagggagtccaaactactgtctatttcatacactg 578

                                                                        
Query: 594  tgataaggcatctagtctaccatctataaagaaggcacaatagtgagtaggaactctctt 653
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577  tgataagtcatctagtctaccatctataaagaaggcacaatagtgagtaggaactctctt 518

                
Query: 654  ccat 657
            ||||
Sbjct: 517  ccat 514


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1056
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1046
Effective search space:   676762
Effective search space used:   676762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)