Query= MSMg01no159_f16.b1 MSMg01no159_f16.b1 CHROMAT_FILE:
MSMg01no159_f16.b1 PHD_FILE: MSMg01no159_f16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:04 2005
(660 letters)
>mm_chr8_101277835_101278889
Length = 1055
Score = 1195 bits (618), Expect = 0.0
Identities = 644/660 (97%), Gaps = 13/660 (1%)
Strand = Plus / Minus
Query: 5 gaattcaacatgagtattcaaagtgaaatctatatatttattttaaaccatagcaaaggg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 gaattcaacatgagtattcaaagtgaaatctatatatttattttaaaccatagcaaaggg 796
Query: 65 caaggcctaaaggatggagaggttatcaaatcatgacttgtaaggtcatatatatgtgaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 caaggcctaaaggatggagaggttatcaaatcatgacttgtaaggtcatatatatgtgaa 736
Query: 125 aaatgaaaggcatccataaatacatttcagtatccaatccccacattggtggtcccatca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 aaatgaaaggcatccataaatacatttcagtatccaatccccacattggtggtcccatca 676
Query: 185 tctgattactgatctctgccacttttgttgccctttaaaaagtacttgggttactgtggg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tctgattactgatctctgccacttttgttgccctttaaaaagtacttgggttactgtggg 616
Query: 245 atttaaaattacatgtccccaagtgctttaatagttagcagatataaaactgtgtcacct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 atttaaaattacatgtccccaagtgctttaatagttagcagatataaaactgtgtcacct 556
Query: 305 taaaagctgtttcatatacccttatgcatcgcatgtattgt----aattaatcagccagg 360
|||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 555 taaaagctgtttcatatacccttatg---------tattgtctataattaatcagccagg 505
Query: 361 agaaacattccacataacttgttcctgatatactaccaaagagcaaagtcaaacaggtat 420
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agaaacattcaatataacttgttcctgatatactaccaaagagcaaagtcaaacaggtat 445
Query: 421 ggacagttacccagcactcaataaaacagatatttacaggatgtttttcctaaaaatgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggacagttacccagcactcaataaaacagatatttacaggatgtttttcctaaaaatgtt 385
Query: 481 tcctcacttgcattcataaggttactgaacaagagaatgtatggtacttgggccttcact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcctcacttgcattcataaggttactgaacaagagaatgtatggtacttgggccttcact 325
Query: 541 ttgaatctgtctcctttactttggttcaccctctaacctatcttaaccaatccttacaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttgaatctgtctcctttactttggttcaccctctaacctatcttaaccaatccttacaag 265
Query: 601 gttgaagacactaatgtaagtcctaaacttgcagggatcttagatgccacaaagagctaa 660
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 264 gttgaagacactaatgtaagtcctaaacttgcagggaccttagatgccacaaagagctaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1055
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1045
Effective search space: 679250
Effective search space used: 679250
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no159_f16.g1 MSMg01no159_f16.g1 CHROMAT_FILE:
MSMg01no159_f16.g1 PHD_FILE: MSMg01no159_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:04 2005
(136 letters)
>mm_chr8_101146279_101146814
Length = 536
Score = 263 bits (136), Expect = 3e-75
Identities = 136/136 (100%)
Strand = Plus / Plus
Query: 1 gacattaacatgataactgttttgaatttacctttataacctacagttaattctctctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gacattaacatgataactgttttgaatttacctttataacctacagttaattctctctca 260
Query: 61 taataatttactaatatcccatctaacttatttttaacccatttttattgaaaacagtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taataatttactaatatcccatctaacttatttttaacccatttttattgaaaacagtag 320
Query: 121 tttgttgtaaaagggt 136
||||||||||||||||
Sbjct: 321 tttgttgtaaaagggt 336
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 136
Length of database: 536
Length adjustment: 8
Effective length of query: 128
Effective length of database: 528
Effective search space: 67584
Effective search space used: 67584
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
