Query= MSMg01no161_a15.b1 MSMg01no161_a15.b1 CHROMAT_FILE:
MSMg01no161_a15.b1 PHD_FILE: MSMg01no161_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:12 2005
(421 letters)
>mm_chr8_112535346_112536165
Length = 820
Score = 605 bits (313), Expect = e-177
Identities = 366/399 (91%), Gaps = 25/399 (6%)
Strand = Plus / Minus
Query: 23 cagagcaacctggtaccctcctttttcacctacttctctctggccatccccctgtcttct 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cagagcaacctggtaccctcctttttcacctacttctctctggccatccccctgtcttct 384
Query: 83 ctgctgagaactggtccacgtagcagagatcactaatccttgccttgagacagacagcca 142
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 383 ctgctgagaactggcccacgtagcagacatcactaatccttgccttgagacagacagcca 324
Query: 143 gatggtgaaatgtgacctttactgtgacaaacacctggcttactgcctgttgtgctctgg 202
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gatggtgaaatgcgacc-ttactgtgacaaacacctggcttactgcctgttgtgctctgg 265
Query: 203 tgacacagctctcagagacgtcaacactgccatcgccaccatcggctccaaacaaaacat 262
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgacacagctctcagagacgtcaacactgccatcgccacca------------------- 224
Query: 263 ccagtttgtgcactggtgtcccctggcttccaggttgttattaattagagcgtctcactg 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 -----ttgtgcactggtgtcccctggcttccaggttgttattaattagagcgtctcactc 169
Query: 323 tggtagctggggaagacctgaacagggggcagcagctggtgaggaggctctttactacag 382
|||||||||||| |||||||||||||||||||||||||||||| |||||| || ||||||
Sbjct: 168 tggtagctgggggagacctgaacagggggcagcagctggtgagcaggctcattgctacag 109
Query: 383 cattgttgagacctgggctcctttgaaccacagctggac 421
|||||||||||||||||||||||||||||||||||||||
Sbjct: 108 cattgttgagacctgggctcctttgaaccacagctggac 70
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 820
Length adjustment: 9
Effective length of query: 412
Effective length of database: 811
Effective search space: 334132
Effective search space used: 334132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_a15.g1 MSMg01no161_a15.g1 CHROMAT_FILE:
MSMg01no161_a15.g1 PHD_FILE: MSMg01no161_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:12 2005
(129 letters)
>mm_chr8_112393678_112394206
Length = 529
Score = 226 bits (117), Expect = 3e-64
Identities = 126/129 (97%)
Strand = Plus / Plus
Query: 1 gtgttaatgcatagtttactttagactaacttcataactgttacctacactgttacctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtgttaatgcatagtttactttagactaacttcataactgttacctacactgttacctac 260
Query: 61 actcccatttactcaagcataaatcgaagtgtaattactcaaagtcttccagatatttaa 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actggaatttactcaagcataaatcgaagtgtaattactcaaagtcttccagatatttaa 320
Query: 121 aatgatagc 129
|||||||||
Sbjct: 321 aatgatagc 329
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 129
Length of database: 529
Length adjustment: 8
Effective length of query: 121
Effective length of database: 521
Effective search space: 63041
Effective search space used: 63041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
