Query= MSMg01no161_e12.b1 MSMg01no161_e12.b1 CHROMAT_FILE:
MSMg01no161_e12.b1 PHD_FILE: MSMg01no161_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:42 2005
(424 letters)
>mm_chr8_130186680_130187505
Length = 826
Score = 745 bits (385), Expect = 0.0
Identities = 403/409 (98%), Gaps = 2/409 (0%)
Strand = Plus / Plus
Query: 18 gaattcc-gctgagcttgtctcc-aggcggtcacagccattgcagttcaggatgcctgtg 75
||||||| ||||||||||||||| | ||||||||||||||||||| ||||||||||||||
Sbjct: 218 gaattccagctgagcttgtctccaatgcggtcacagccattgcagctcaggatgcctgtg 277
Query: 76 atactcagccagcaaggaaatcccctggttgaatcaacttgagtccagggtaaagcatga 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 atactcagccagcaaggaaatcccctggttgaatcaacttgagtccagggtaaagcatga 337
Query: 136 atttggctgaaagtcccaacttagaacttggactctgggttttatgttaatctgatatat 195
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 atttagctgaaagtcccaacttagaacttggactctgggttttatgttaatctgatatat 397
Query: 196 ttttctccagatgtaagagaacattgtctgggttgccaagaaactctttcaatttaacac 255
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ttttctccacatgtaagagaacattgtctgggttgccaagaaactctttcaatttaacac 457
Query: 256 tgagtcaaacagctataggactataatatactataatatactgcacagatgtcaagaaaa 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tgagtcaaacagctataggactataatatactataatatactgcacagatgtcaagaaaa 517
Query: 316 tgtagtccattggccaagtcagtgtaggcatggctcccaacaggcatgccagagacaccc 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tgtagtccattggccaagtcagtgtaggcatggctcccaacaggcatgccagagacaccc 577
Query: 376 aacatctctacagattttcattccagggtgccagagtcttgatttatga 424
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 aacatctctacagattttcattccagggtgccagagtcttgatttatga 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 826
Length adjustment: 9
Effective length of query: 415
Effective length of database: 817
Effective search space: 339055
Effective search space used: 339055
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_e12.g1 MSMg01no161_e12.g1 CHROMAT_FILE:
MSMg01no161_e12.g1 PHD_FILE: MSMg01no161_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:43 2005
(140 letters)
>mm_chr8_130199007_130199547
Length = 541
Score = 257 bits (133), Expect = 2e-73
Identities = 139/141 (98%), Gaps = 1/141 (0%)
Strand = Plus / Minus
Query: 1 tagttttgaagagaatcttaattagtaacaccagcaagg-aaaaaaaaatcccatttgga 59
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 341 tagttttgaagagaatcttaattagtaacaccagcaaggaaaaaaaaaatcccatttgga 282
Query: 60 ccaagattccatgtcccaaaagttgtcatctcgactctcctaaggcttatggataactct 119
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ccaagattccatgtcccagaagttgtcatctcgactctcctaaggcttatggataactct 222
Query: 120 ttatttctggaactatcttgt 140
|||||||||||||||||||||
Sbjct: 221 ttatttctggaactatcttgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 140
Length of database: 541
Length adjustment: 8
Effective length of query: 132
Effective length of database: 533
Effective search space: 70356
Effective search space used: 70356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
