Query= MSMg01no161_j03.b1 MSMg01no161_j03.b1 CHROMAT_FILE:
MSMg01no161_j03.b1 PHD_FILE: MSMg01no161_j03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:19 2005
(422 letters)
>mm_chr8_111706223_111707044
Length = 822
Score = 679 bits (351), Expect = 0.0
Identities = 393/407 (96%)
Strand = Plus / Minus
Query: 16 gaattctaccacattagggaatcctcttgaaatatattctgaaaacttacactacaataa 75
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 412 gaattctaccacattagggaatgttcttgaaatatattctgaaaacttacactacaataa 353
Query: 76 gcaacatttggagctctgaagtgatagcaagaccatttagtctcttctataatttcttat 135
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gcaatagctggagctctgaagtgatagcaagaccatttagtctcttctataatttcttat 293
Query: 136 tattcactactttaaatactgttaaaattatactagtttcttaaattgggtaagaaaatc 195
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 292 tattcactactttaaatactgttaaaattatactagtttcttgaattgggtaagaaaatc 233
Query: 196 aaatcagatggccactggtaatggttactgtactctatagatttagaatcacctaggaga 255
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 232 aaatcagacggccactggtaatggttactgtactctatagatttagaatcatctaggaga 173
Query: 256 cacacttagtatgtcagtaagaggggtcccatggagctctaactgagaatcacctccgga 315
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 172 cacacttagtgtgtcagtaagaggggtcccgtggagctctaactgagaatcacctccgga 113
Query: 316 tgcggacagtactatcccaggggctcacatcctagactgcatacaaaggaaaacgtgaac 375
||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 112 tgcagacagtactatcccaggggctcacatcctagactgcatacaaagggaaatgtgaac 53
Query: 376 agagcaccattctccagtactctcggcttccggcttcctgctttcgg 422
|||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 52 agagcaccattctccagttctctcggcttccggcttcctgctttcgg 6
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_j03.g1 MSMg01no161_j03.g1 CHROMAT_FILE:
MSMg01no161_j03.g1 PHD_FILE: MSMg01no161_j03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:19 2005
(417 letters)
>mm_chr8_111614666_111615482
Length = 817
Score = 658 bits (340), Expect = 0.0
Identities = 368/382 (96%), Gaps = 8/382 (2%)
Strand = Plus / Plus
Query: 1 ctaagtctgaagggaaactagtttggggggccgggcagtggtggcgcgcgcctttaatcc 60
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 209 ctaagtctgaagggaaactagtctggggggccgggcagtggtggcgcacgcctttaatcc 268
Query: 61 cagcactcgggaggcagaagcaggcggatttctgagttccaggacagccagagctacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 269 cagcactcgggaggcagaagcaggcggatttctgagttccaggacagccagggctacaca 328
Query: 121 gataaaccctgtcttggaaaacaaacaaacaaacaaacaaacaaacaaacaaacaaaggt 180
|||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 329 gataaaccctgtcttggaaaacaaacaaacaaacaaacaaacaaacgaa--------ggt 380
Query: 181 ttggggataggtcttttttcattatgtgaaaactggttcttttaaatggtggtgttagac 240
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 381 ttggggataggtcttttttcattatgtggaaactggttctcttaaatggtggtgttagac 440
Query: 241 ggagagttttctttctttcctttctgttgtgtttttggttaggcatttagatacacccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggagagttttctttctttcctttctgttgtgtttttggttaggcatttagatacacccag 500
Query: 301 tagacagtctcccgaagctgtgtgcttcttctctttatagctagtctttcacagatggac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagacagtctcccgaagctgtgtgcttcttctctttatagctagtctttcacagatggac 560
Query: 361 atagtgttatggctataacttt 382
||||||||||||||||||||||
Sbjct: 561 atagtgttatggctataacttt 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
