Query= MSMg01no162_d16.b1 MSMg01no162_d16.b1 CHROMAT_FILE:
MSMg01no162_d16.b1 PHD_FILE: MSMg01no162_d16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:32 2005
(311 letters)
>mm_chr8_73042022_73042731
Length = 710
Score = 571 bits (295), Expect = e-167
Identities = 304/307 (99%), Gaps = 1/307 (0%)
Strand = Plus / Minus
Query: 5 gaattcttgaggccttggctctgtaattaaatcgcagaggctgtgactctcagggattag 64
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 510 gaattcttgaggccttggctctgtaattaaat-gcagaggctgtgactctcagggattag 452
Query: 65 ctcgggctgagggggctcctaggcctgatgcaaaggcccttgccctctccccctaggctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ctcgggctgagggggctcctaggcctgatgcaaaggcccttgccctctccccctaggctg 392
Query: 125 gaccgcttcgagaaaaccaacgagatgcttctgaacttcaacaatctgtccagtgtgcgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gaccgcttcgagaaaaccaacgagatgcttctgaacttcaacaatctgtccagtgtgcgg 332
Query: 185 ctgcaacagatgagtgagcgcttcatgcaccatacccgcaccttggtggacatgaaacgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ctgcaacagatgagtgagcgcttcatgcaccatacccgcaccttggtggacatgaaacgg 272
Query: 245 gatctggacagcattttccgaaggatcaggtggttcctccccccagccagatgcctcctc 304
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 271 gatctggacagcattttccgaaggatcaggtggcccctccccccagccagatgcctcctc 212
Query: 305 agcctgt 311
|||||||
Sbjct: 211 agcctgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 710
Length adjustment: 9
Effective length of query: 302
Effective length of database: 701
Effective search space: 211702
Effective search space used: 211702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no162_d16.g1 MSMg01no162_d16.g1 CHROMAT_FILE:
MSMg01no162_d16.g1 PHD_FILE: MSMg01no162_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:33 2005
(287 letters)
>mm_chr8_72919363_72920049
Length = 687
Score = 547 bits (283), Expect = e-160
Identities = 286/287 (99%)
Strand = Plus / Plus
Query: 1 acacttccagctgatatgtccctggtctgctgaccatgaacatgagggcattcttagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acacttccagctgatatgtccctggtctgctgaccatgaacatgagggcattcttagctc 260
Query: 61 ttgcctaagcaccgtcacacccagagaggccagatgggcaggcgagccacatgggtatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgcctaagcaccgtcacacccagagaggccagatgggcaggcgagccacatgggtatcc 320
Query: 121 tgctagcgggtttctctgcccagcctggatcacctctggagcagagccagctggagggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgctagcgggtttctctgcccagcctggatcacctctggagcagagccagctggagggga 380
Query: 181 agtctgggcaggggagggtggggcaggctggccaggtggcagtggcctggctctggcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtctgggcaggggagggtggggcaggctggccaggtggcagtggcctggctctggcata 440
Query: 241 caagccctgttgtagccctgaatggagcatagccagcagcggacacg 287
||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 caagccctggtgtagccctgaatggagcatagccagcagcggacacg 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
