Query= MSMg01no163_o18.b1 MSMg01no163_o18.b1 CHROMAT_FILE:
MSMg01no163_o18.b1 PHD_FILE: MSMg01no163_o18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:37 2005
(303 letters)
>mm_chr8_117562036_117562737
Length = 702
Score = 491 bits (254), Expect = e-143
Identities = 290/302 (96%), Gaps = 5/302 (1%)
Strand = Plus / Minus
Query: 4 ggaattcacccctgcctcctctacttcccctccctggcagctccctcgcagctcagccaa 63
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ggaattcactcctgcctcctctacttcccctccctggcagctccctcgcagctcagccaa 443
Query: 64 gcaggaggtttagaatttggaaaacagaagggaaaagtgctaccctgcaaagcaggcctg 123
||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 442 gcaggaggtttag-atttggaaaacag-agagaaaagtgctaccctgcaaagcaggcctg 385
Query: 124 gtcaccaggcctgaacttggtgacacacaggaagagaa-gggcctcttctgccagggaca 182
| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 384 gccaccaggcctgaacttggtgacacacaggaagagaatgggactcttctgccagggaca 325
Query: 183 tatacatgcatatatgtatgtataaaatattacatgtggatggaaagaana-tcagaaca 241
|||||||||||||| ||||||||||||||||| |||||||||||||||| | ||||||||
Sbjct: 324 tatacatgcatatacgtatgtataaaatattatatgtggatggaaagaa-agtcagaaca 266
Query: 242 gcaggagcatacctagaataacacccactccatccattgctgcctctcgtcaggcttctg 301
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 265 gcaggagcatacctagaataacacccactccgtccattgctgcctctcgtcaggcttctg 206
Query: 302 gc 303
||
Sbjct: 205 gc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 702
Length adjustment: 9
Effective length of query: 294
Effective length of database: 693
Effective search space: 203742
Effective search space used: 203742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no163_o18.g1 MSMg01no163_o18.g1 CHROMAT_FILE:
MSMg01no163_o18.g1 PHD_FILE: MSMg01no163_o18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:37 2005
(233 letters)
>mm_chr8_117398460_117399092
Length = 633
Score = 443 bits (229), Expect = e-129
Identities = 232/233 (99%)
Strand = Plus / Plus
Query: 1 tctcgttgagtacttcactttctgggtcagttttcttctcttgtgtatttgcaagagtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcgttgagtacttcactttctgggtcagttttcttctcttgtgtatttgcaagagtac 260
Query: 61 cggccaggccacacagcctggtctcttaggtaccagaggaggcaaagacatctgagtctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cggccaggccacacagcctggtctcttaggtaccagaggaggcaaagacatctgagtctc 320
Query: 121 tgagctggttgcttggtgtgaccaagtccctcccttccccacactctggcgatcttcttc 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 tgagctggttgcttggtgtgaccaagtccctcccttccccacactctggcaatcttcttc 380
Query: 181 ataatgggggtttgtctccttggcagttttctgaacggtagccccagctgcaa 233
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataatgggggtttgtctccttggcagttttctgaacggtagccccagctgcaa 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
