Query= MSMg01no166_g10.b1 MSMg01no166_g10.b1 CHROMAT_FILE:
MSMg01no166_g10.b1 PHD_FILE: MSMg01no166_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:53 2005
(311 letters)
>mm_chr8_6723173_6723883
Length = 711
Score = 551 bits (285), Expect = e-161
Identities = 302/309 (97%), Gaps = 4/309 (1%)
Strand = Plus / Plus
Query: 5 gaattcttactttgattctttgagggattctaagacataca--gcactttgtaacacact 62
||||||||||||||||||||||||||||||||||||| || || ||||||||||||||
Sbjct: 205 gaattcttactttgattctttgagggattctaagaca--catggcgctttgtaacacact 262
Query: 63 tgaatggtataagaagccacagcgctttggttaacatcattctctccaccctcctttctg 122
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgaatggtataagaagccacagccctttggttaacatcattctctccaccctcctttctg 322
Query: 123 acaaagcaaagaatggttgggagcttagaaggttacaaatgttttgtaaaaatagtgcca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 acaaagcaaagaatggttgggagcttagaaggttacaaatgttttgtaaaaatagtgcca 382
Query: 183 cctgttgacttgtatcatgctggcaaaagacagaaggagcctgttcataggcagacagct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cctgttgacttgtatcatgctggcaaaagacagaaggagcctgttcataggcagacagct 442
Query: 243 ctataatgagtaacaatagagaaagagccagattagaagagtctaggcatacatgtttag 302
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 443 ctataatgagtaacaatagagaaagagccagactagaagagtctaggcatacatgtttag 502
Query: 303 tatctcaca 311
|||||||||
Sbjct: 503 tatctcaca 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_g10.g1 MSMg01no166_g10.g1 CHROMAT_FILE:
MSMg01no166_g10.g1 PHD_FILE: MSMg01no166_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:53 2005
(655 letters)
>mm_chr8_6883103_6884159
Length = 1057
Score = 1145 bits (592), Expect = 0.0
Identities = 628/648 (96%), Gaps = 14/648 (2%)
Strand = Plus / Minus
Query: 1 cctgaaatatgttcctaaccctgtggtttatctagggatactgtacacaatgtaaagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 cctgaaatatgttcctaaccctgtggtttatctagggatactgtacacaatgtaaagaat 612
Query: 61 gggctaggaagagacaggaaggaaaaagttgtgatgtcctcctggcttgggaagtcatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gggctaggaagagacaggaaggaaaaagttgtgatgtcctcctggcttgggaagtcatag 552
Query: 121 agcaggtaacaagaatctaccccctaatttctgaactcagctttcacaaaggttgcactc 180
|||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 551 agcaggtaacaagaatataccccctaatttctgaactcagctttcgcaaaggttgcactc 492
Query: 181 ccttcatctctgtataaaaatttaaaatgtacttataatgagctattgtttctcactttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ccttcatctctgtataaaaatttaaaatgtacttataatgagctattgtttctcactttt 432
Query: 241 aaaattttgaatagattcagatctttgcaaggataaactcctaacacctatgacaaatat 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aaatttttgaatagattcagatctttgcaaggataaactcctaacacctatgacaaatat 372
Query: 301 gattttctacacatttttaatttgtgttttctttcaccacatgatgcttaaacttaaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gattttctacacatttttaatttgtgttttctttcaccacatgatgcttaaacttaaatt 312
Query: 361 tctatgactatttaaatttagaattaggcccaatttctatataatttcgcctctttatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tctatgactatttaaatttagaattaggcccaatttctatataatttcgcctctttatga 252
Query: 421 cccagctaaataaagaaa--aaaatggaaaatatgaaaagggagaacatgggagacagag 478
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cccagctaaataaagaaacaaaaatggaaaatatgaaaagggagaacatgggagacagag 192
Query: 479 agagagagagagagagagagagagagagagagtactattgtgtagcagaattatttttgt 538
||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 191 agagagagagagagagagac------------tactattgtgtagcagaattatctttgt 144
Query: 539 tcaattaatttaaatattaatacaagaagcttgtgattggacagggaaaagggaggcaga 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 tcaattaatttaaatattaatacaagaagcttgtgattggacagggaaaagggaggcaga 84
Query: 599 gctaagagttgtagaagcagggagcaacacaagagatgaggaggagaa 646
||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 gctaagatttgtagaagcagggagcaacacaagagatgaggaggagaa 36
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1057
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1047
Effective search space: 675315
Effective search space used: 675315
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
