CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTTAATCTTTTGTATTCTGTTGCTGATGCTCACATCTATGGTTACA
GATTTCTTTCCTAGGGTTTCTATCTCCAGCGTTACCTCACTTTGGGTTTT
CTTTATTGTGTCTACTTCCCTTTTTAGGTCTTGGATGGTTTTATTCAATT
CCATCACCTGTTTGGTTGTGTTTTCCTGCAATTCTTTAAGGGATTTTTGT
GTTTCCTCTTTAATGTCTTCTACCTGTTTAGCAGTGTTCTCCTGTATTTC
TTTAAGTGAGTTACTAAAGTCCTTCTTGATGTCCTCTACCATCATCATGA
TTATATTTTTTTACCTCCGCCCCCACCTTTTCGGGTGTGTTGGGGTACCC
TGGACTGGGCGAAGTGGGAGAACTGGGTTCTGATGATGGTGAGTGGTCTT
GGTTTCTGTTAGTAAGATTCTTACGTTTACCTTTCGCCATCTGGCTATCT
CTGGAGTTAGTTGTTTTGGTTGTCTCTGTTTAGAGATTGTTCTTCTGGTG
ATTCTCTTACCCTCTATCAGCAGACCTGGGAGACTAGCTCTCTCCCCTGA
ATTTCAGTGGTCAGAGCACTCTCTGCAGGCAAGCTCTCCTCTTACAGGGA
AGGTGCACAGATATCTGGGGTTTGGACCTCCCTTCTGGCCGAA

TCATGATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGAAGCTTGACTGGAAATTT
AATATTCTTAACTACAGGTTACTAGAATCTGTTTTAGATAGTCGGGTTAG
TGTCCTGTTGGGCAATAGACACTGTCATAAGATTTACCCTGGATAAGAAA
AGAATACAGTCTGAGAGAAGAAAACTCAGTTGATAAAACACTCACCCTGT
AAACAAAACATTATTAGTTCAATGCCCCGAATCCATTTTAAACTACTAGA
TATGATGATCCATGCTTGTAATCTGAGAACCAGGCAGGCAAAGACAGGAG
AACCCCTGGATCTCACCGATTAACCAGTCTAACATAATTTGTGAGTAACA
TGTCATTAAAGGACCCTGTCTCAAAGGAGGCAGATGATGTTCTTAGCGTT
GACAGTTGAGACTGTTCTCTGGCTTTGACATGCATACACGTGCACATACT
TGAACATGCACAAACACAGACACCCATGGGAAGAGAAAATAGAGTACAAA
GACAGTAGGAAGGTGCAGAGAAGTGGAACCTTGTGGGAGAATGTTCAGGG
TGCCTTGGGGTCCTTCTGTGGAGGCAGGATGATGCCTCTGCAGGGAGATC
GGGCAGTTTGGGGTGGAAAGCATCAGTTAACACCCTGCCATGTCAGTCGG
TC

Query= MSMg01no169_k09.g1 MSMg01no169_k09.g1 CHROMAT_FILE:
MSMg01no169_k09.g1 PHD_FILE: MSMg01no169_k09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:24 2005
         (624 letters)



>mm_chr8_118445532_118446555
          Length = 1024

 Score =  745 bits (385), Expect = 0.0
 Identities = 400/405 (98%), Gaps = 2/405 (0%)
 Strand = Plus / Minus

                                                                        
Query: 221  gatatgatgatccatgcttgtaatctgagaaccaggcaggcaaagacaggagaacccctg 280
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 gatatgatgatccatgcttgtaatctgagaaccaggcaggcaaagacaggagaacccctg 965

                                                                        
Query: 281  gatctcaccgattaaccagtctaacataatttgtgagtaacatgtcattaaaggaccctg 340
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964  gatctcaccgattaaccagtctaacataatttgtgagtaacatgtcattaaaggaccctg 905

                                                                        
Query: 341  tctcaaaggaggcagatgatgttcttagcgttgacagttgagactgttctctggctttga 400
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 904  tctcaaaggaggcagatgatgttcttggcgttgacagttgagactgttctctggctttga 845

                                                                        
Query: 401  catgcatacacgtgcacatacttgaacatgcacaaacacagacacccatgggaagagaaa 460
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844  catgcatacacgtgcacgtacttgaacatgcacaaacacagacacccatgggaagagaaa 785

                                                                        
Query: 461  atagagtacaaagacagtaggaaggtgcagagaag-tggaaccttgtgggagaatgttca 519
            |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 784  atagagtacaaagacagtaggaaggtgcagag-agttggaaccttgtgggagaatgttca 726

                                                                        
Query: 520  gggtgccttggggtccttctgtggaggcaggatgatgcctctgcagggagatcgggcagt 579
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725  gggtgccttggggtccttctgtggaggcaggatgatgcctctgcagggagatcgggcagt 666

                                                         
Query: 580  ttggggtggaaagcatcagttaacaccctgccatgtcagtcggtc 624
            |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 665  ttggggtggaaagcatcagttaacaccctgccgtgtcagtcggtc 621


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space:   622596
Effective search space used:   622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)