Query= MSMg01no173_d10.b1 MSMg01no173_d10.b1 CHROMAT_FILE:
MSMg01no173_d10.b1 PHD_FILE: MSMg01no173_d10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:50 2005
(313 letters)
>mm_chr8_13473403_13474115
Length = 713
Score = 571 bits (295), Expect = e-167
Identities = 301/303 (99%)
Strand = Plus / Minus
Query: 9 tccctctacacagccctggggacaagcctggagtagaacccagctcccagctgtctggga 68
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 511 tccctctacacagccctggggacaaccctggagtagaacccagctcccagctgtctggga 452
Query: 69 gcagtcactgtggcatggttctgtctaggtggcagctcacacaccgtcactcatagctca 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gcagtcactgtggcatggttctgtctaggtggcagctcacacaccgtcactcatagctca 392
Query: 129 ataatagaatggcccaggaggccaaggtctgccccttccagtgctccctgaccagccatt 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ataatagaatggcccaggaggccaaggtctgccccttccagtgctccctgaccagccatt 332
Query: 189 catagcacactctgccctactgatagatgggggcagatactaagtacgcccccaccatat 248
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 catagcacactctgcccttctgatagatgggggcagatactaagtacgcccccaccatat 272
Query: 249 cgtatataatttaagttcccacacaggaatcttcacttcaaatctttcctatgtgccaag 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cgtatataatttaagttcccacacaggaatcttcacttcaaatctttcctatgtgccaag 212
Query: 309 ttt 311
|||
Sbjct: 211 ttt 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_d10.g1 MSMg01no173_d10.g1 CHROMAT_FILE:
MSMg01no173_d10.g1 PHD_FILE: MSMg01no173_d10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:51 2005
(280 letters)
>mm_chr8_13325746_13326425
Length = 680
Score = 528 bits (273), Expect = e-154
Identities = 279/281 (99%), Gaps = 1/281 (0%)
Strand = Plus / Plus
Query: 1 tcggtgagaattataaatcggtgtaggctgtttccctgggtaggatgggtggccatgggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcggtgagaattataaatcggtgtaggctgtttccctgggtaggatgggtggccatgggg 260
Query: 61 atagagtttagcagtgtgcttagcatgttcagagtaccagatccaatctccagtgctgct 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 atagagtttagcagtgtgcttagcatgttcagagtgccagatccaatctccagtgctgct 320
Query: 121 gttgagaaagcaaacgaccagggcactgttattgttcttgagataaaggtcctactatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttgagaaagcaaacgaccagggcactgttattgttcttgagataaaggtcctactatgt 380
Query: 181 tgctaaagctaggcctgaactcgcaaatcctcccgcctcacatgagtaccatggatcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgctaaagctaggcctgaactcgcaaatcctcccgcctcacatgagtaccatggatcaaa 440
Query: 241 gatgtctagggccacacctagctcataaaaaaa-ccagacg 280
||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 gatgtctagggccacacctagctcataaaaaaaaccagacg 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
