CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGAGAACTGGAAAGGCATTCTCAGGTAGTAATAGGTAATGCGAAAT
TTTTATGAAAGAGATGAAATTTAAATAAGCTCAGAGCAACCTCATTCCTC
TGAATGTTCTTCCTGGGACCGTTATATTCTCCCTTGGGTCATTTCAGGCT
CTCTTCTCCGGAACTCAAAGGAAAAATGGGGTCATTTCCTAACAAAGCCG
GTGGTGCTAGAGTAGACTTCAGGGAGTTTACTGTGAAAATATGCAAAATG
GGCACCTCTGGATCACAGCCATGAGAGGCTATGAGGACAGTTTCTGCTTC
CCAGTTTGTTTTTTGTCATCTTAACTCCCACTTGCTTTCTCTGCTGCTCA
GTACACCGTGGGGGATACACAGATCTTTGACGCTGCAAACTCTCAGACAG
CAAACTTTCTTGCTGGAACTAGGAGAAAGCAAAAGAGTAGCAGAAGGGAC
AGCAGGTTGATAAGCAGACATTCCTAATGGAGGACATGGGAGGACCACAG
CACAGGATGCTCTGCTTTCTGTCTCTGGAGTCCATCAGGCACGTTGTCTA
AATAATTAAGATGGAGCTGCTCTGGAAAGTAACACTGGGAAGACATGCTC
TGCCTGACACTACCCCCAGAATGCACCTCAGCCATGATAAGGGCTCTTGC
TTCTCTCCTGCTACTC

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCAAGGATGGAGGACAAAGACAAAGAAGTA
ATTTAAACAGACATATATTAGGCGAAAAACAGAAAGGAACACAAAAATAT
TTACAAAAAAAAATCTAAGATGCACTCAAGAGGTTGAACCTGAGAATTCA
TGGTGTAGAAGAAAGAATCACACAGAATACACAGACCAGCTAATGTAATT
ACAGCAGAATACCCCCAAAACTTAGGGAAACAAGGAATTGTCCAAACACA
AGAGGTAAACAGAACTCCAAGTATCCATGACCAGAGAAGTTCTCCTTGAC
ACAGCACAACCATTTTGTCAACAACACAAAGCAAAACTCAACCAACCAAC
CAAATAAACAAGAGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAAGACAGATAGACAAAAAGTAAATGT
CATAGTTACTTTTCTATTGTTGGGCTTATTTTGAGATTGTGATTTTAGAG
AGAGAAGAGTACATCACCATTGTGGTAAAGGAGTATGGCAGCCAGCAAAG
CATGGAGCTGGAGCTGGAGCTGGAGCTGGAGCTGGAGCTGGAGCTGGAGC
TGGAGCTGGAGCTGGAGCTGGAGCTGGAGCTGGAGCTGGATCTGCGGCTG
GAGATCTTGATCTATAAGCAGGAAGGAGAGAGTACAGTACGAGCAGCN

Query= MSMg01no174_d17.b1 MSMg01no174_d17.b1 CHROMAT_FILE:
MSMg01no174_d17.b1 PHD_FILE: MSMg01no174_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:03 2005
         (323 letters)



>mm_chr8_130525714_130526436
          Length = 723

 Score =  576 bits (298), Expect = e-169
 Identities = 313/318 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcagagaactggaaaggcattctcaggtagtaataggtaatgcgaaatttttatg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagagaactggaaaggcattctcaggtagtaataggtaatgcgaaatttttatg 263

                                                                       
Query: 64  aaagagatgaaatttaaataagctcagagcaacctcattcctctgaatgttcttcctggg 123
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaagagatgaaatttaactaagctcagagcaacctcattcctctgaatgttcttcctggg 323

                                                                       
Query: 124 accgttatattctcccttgggtcatttcaggctctcttctccggaactcaaaggaaaaat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 accgttatattctcccttgggtcatttcaggctctcttctccggaactcaaaggaaaaat 383

                                                                       
Query: 184 ggggtcatttcctaacaaagccggtggtgctagagtagacttcagggagtttactgtgaa 243
           |||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||
Sbjct: 384 ggggtcatttcctaacaaagccagtggtgctagagtacacttcagggaatttactgtgaa 443

                                                                       
Query: 244 aatatgcaaaatgggcacctctggatcacagccatgagaggctatgaggacagtttctgc 303
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 444 aatatgcaaaatgggcacctctggatcacagccaggagaggctatgaggacagtttctgc 503

                             
Query: 304 ttcccagtttgttttttg 321
           ||||||||||||||||||
Sbjct: 504 ttcccagtttgttttttg 521


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space:   224196
Effective search space used:   224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no174_d17.g1 MSMg01no174_d17.g1 CHROMAT_FILE:
MSMg01no174_d17.g1 PHD_FILE: MSMg01no174_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:03 2005
         (239 letters)



>mm_chr8_130672921_130673559
          Length = 639

 Score =  451 bits (233), Expect = e-131
 Identities = 236/237 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaacagaaaggaacacaaaaatatttacaaaaaaaaatctaagatgcactcaagaggtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aaaacagaaaggaacacaaaaatatttacaaaaaaaaatctaagatgcactcaagaggtt 249

                                                                       
Query: 61  gaacctgagaattcatggtgtagaagaaagaatcacacagaatacacagaccagctaatg 120
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 248 gaacctgagaattcatggtgtagaagaaagaatcacatagaatacacagaccagctaatg 189

                                                                       
Query: 121 taattacagcagaatacccccaaaacttagggaaacaaggaattgtccaaacacaagagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 taattacagcagaatacccccaaaacttagggaaacaaggaattgtccaaacacaagagg 129

                                                                    
Query: 181 taaacagaactccaagtatccatgaccagagaagttctccttgacacagcacaacca 237
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 taaacagaactccaagtatccatgaccagagaagttctccttgacacagcacaacca 72


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space:   144900
Effective search space used:   144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)