Query= MSMg01no178_b02.b1 MSMg01no178_b02.b1 CHROMAT_FILE:
MSMg01no178_b02.b1 PHD_FILE: MSMg01no178_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:46 2005
(323 letters)
>mm_chr8_15540003_15540726
Length = 724
Score = 574 bits (297), Expect = e-168
Identities = 312/317 (98%), Gaps = 1/317 (0%)
Strand = Plus / Minus
Query: 5 gaattcctagagtaaaatttttcttctacctgttgtgcagttcaatgtcataatgaaaac 64
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gaattcctagagtaaaattttccttctacctgttgtgcagttcaatgtcataatgaaaac 462
Query: 65 aatgccctgactttttaaaacattaaaagaagggcatataaagggtgtgtcaaccagagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aatgccctgactttttaaaacattaaaagaagggcatataaagggtgtgtcaaccagagt 402
Query: 125 tcattcttcaacaaagaggatcagagatgtctttctgccaagatggcaaagtaagactct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tcattcttcaacaaagaggatcagagatgtctttctgccaagatggcaaagtaagactct 342
Query: 185 ttttacattttgaattatagatctacatgtctaataattccctcctgtgccctgaggcca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ttttacattttgaattatagatctacatgtctaataattccctcctgtgccctgaggcca 282
Query: 245 tagtggtaacatctcaaagttttttttt-ttgttgttgttttttttttttaatgtattac 303
||||||||||||||||||||||||| || ||||||||||| || ||||||||||||||||
Sbjct: 281 tagtggtaacatctcaaagttttttgttgttgttgttgttgttgttttttaatgtattac 222
Query: 304 tgcttaactgctatgtg 320
|||||||||||||||||
Sbjct: 221 tgcttaactgctatgtg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 724
Length adjustment: 9
Effective length of query: 314
Effective length of database: 715
Effective search space: 224510
Effective search space used: 224510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no178_b02.g1 MSMg01no178_b02.g1 CHROMAT_FILE:
MSMg01no178_b02.g1 PHD_FILE: MSMg01no178_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:46 2005
(387 letters)
>mm_chr8_15526418_15527204
Length = 787
Score = 748 bits (387), Expect = 0.0
Identities = 387/387 (100%)
Strand = Plus / Plus
Query: 1 actaaagtgattttcttgtgtgtgtggactcattaggctgtattcaaatctccttcataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actaaagtgattttcttgtgtgtgtggactcattaggctgtattcaaatctccttcataa 260
Query: 61 tggagacttgctcttaattgccaataatttctgaagcaaaatattatgagtaaacctatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggagacttgctcttaattgccaataatttctgaagcaaaatattatgagtaaacctatt 320
Query: 121 tactttacaaaacagtttatacctagttaaatgaatttatatgtaaaacattggtatcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tactttacaaaacagtttatacctagttaaatgaatttatatgtaaaacattggtatcca 380
Query: 181 taacatcatacacaaatggaaacgatatacatatcttttcaggtctacctgatagcatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taacatcatacacaaatggaaacgatatacatatcttttcaggtctacctgatagcatgg 440
Query: 241 gttagtctctttaccaaattacctcatatctagaaatcataattatctacttgatcccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttagtctctttaccaaattacctcatatctagaaatcataattatctacttgatcccag 500
Query: 301 attattttaactattgagggtcttttgtgcttccacatgagtttaaggattcttgagaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attattttaactattgagggtcttttgtgcttccacatgagtttaaggattcttgagaga 560
Query: 361 gactgactgtaccgagggaaggtgggt 387
|||||||||||||||||||||||||||
Sbjct: 561 gactgactgtaccgagggaaggtgggt 587
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
