Query= MSMg01no181_i24.b1 MSMg01no181_i24.b1 CHROMAT_FILE:
MSMg01no181_i24.b1 PHD_FILE: MSMg01no181_i24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:03 2005
(688 letters)
>mm_chr8_59174198_59175285
Length = 1088
Score = 750 bits (388), Expect = 0.0
Identities = 432/451 (95%), Gaps = 8/451 (1%)
Strand = Plus / Minus
Query: 239 tagatctcaggctaaactgcaacttgttaggtagttaaagataacttcgaatgtcttatc 298
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1088 tagatctcaggctaaactgcaacttgttaggtagttaaagataacttcaaatgtcttatc 1029
Query: 299 ctcctgcctttaaaccccaaatgataagattagatattccatttttttgtttcatgattg 358
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1028 ctcctacctttaaaccccaaatgataagattagatattccatttttttgtttcacgattg 969
Query: 359 ttctaaaggatatcttttgagcaatgcaagtacatacacacacacacaca-cacacacac 417
||||||||||||||||||||||||||||||||||||||| || | ||| ||||
Sbjct: 968 ttctaaaggatatcttttgagcaatgcaagtacatacacgca-------agtacatacac 916
Query: 418 acacacacacacacacacacacacacagttaagacacttggcatgtctctgaaggtctgt 477
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 915 acacacacacacatacacacacacacagttaagacacttgacatgtctctgaaggtctgt 856
Query: 478 gctctaatgtaaagcctgtactatctatctctttcctttaactttccctaatatactcaa 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 gctctaatgtaaagcctgtactatctatctctttcctttaactttccctaatatactcaa 796
Query: 538 ctctaatttattcaaattcacattgaaaagtcaagctccctgccatgtctggggcaaatt 597
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ctctgatttattcaaattcacattgaaaagtcaagctccctgccatgtctggggcaaatt 736
Query: 598 ccctatgctaagaaattcctctggctaaagtcagcagcatcaggctgtactcnctactac 657
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 735 ccctatgctaagaaattcctctggctaaagtcagcagcatcaggctgtactccctactac 676
Query: 658 tgctaacaggatagccacggtctccctagag 688
||||||||||||||||| |||||||||||||
Sbjct: 675 tgctaacaggatagccatggtctccctagag 645
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1088
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1078
Effective search space: 730884
Effective search space used: 730884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no181_i24.g1 MSMg01no181_i24.g1 CHROMAT_FILE:
MSMg01no181_i24.g1 PHD_FILE: MSMg01no181_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:03 2005
(291 letters)
>mm_chr8_59021627_59022317
Length = 691
Score = 499 bits (258), Expect = e-146
Identities = 277/290 (95%), Gaps = 11/290 (3%)
Strand = Plus / Plus
Query: 1 taaggagggaaaagaagtagacaaaataatgcattttgtagaaaagtatgatatacattt 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 taaggagggaaaagaagtagacaaaataatacattttgtagaaaagtatgatatacattt 260
Query: 61 aaattctattctttaaatacttagttttgataccagtaaatagtggaaataatgaagcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaattctattctttaaatacttagttttgataccagtaaatagtggaaataatgaagcat 320
Query: 121 gtttggtttgtttgtttcctgtacatttaagttacatttaagtgagactggtatggtggc 180
|||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 321 gtttggtttgtttgcttcctgtacatttaagt-----------gagactggtatggtggc 369
Query: 181 gctgtaatcccgcacacagaagactgaggacggagggctgaggtcagcattagttacaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gctgtaatcccgcacacagaagactgaggacggagggctgaggtcagcattagttacaca 429
Query: 241 gaaactatgaggcagcctgggctacatagttaaaaaaacaaacaaaacta 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gaaactatgaggcagcctgggctacatagttaaaaaaacaaacaaaacta 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
