MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-184I09
Chromosome	8 (Build37)
Map Location	129,175,430 - 129,307,896
singlet/doublet	doublet
Overlap gene	none
Upstream gene	4933403G14Rik, 2310079N02Rik, E330039K12Rik, BC021891, Kcnk1, Slc35f3, LOC668434, 1810063B05Rik, EG619653, Irf2bp2
Downstream gene	Tomm20, Rbm34, LOC100043368, Gabarapl2-ps8_1688.1, Pard3, EG628847
Link	Open Mouse BAC browser

Click to get alignment info.

name	4933403G14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74393 MGI:1921643
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310079N02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66566 MGI:1913816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E330039K12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270109 MGI:2445010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC021891 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234878 MGI:2385307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcnk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16525 MGI:109322
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc35f3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210027 MGI:2444426
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668434 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668434
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 612 ESTs, 7 Proteins pseudo : _no_value

name	1810063B05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67892 MGI:1915142
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG619653 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619653 MGI:3648068
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 84 ESTs, 7 Proteins

name	Irf2bp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270110 MGI:2443921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 228 ESTs, 10 Proteins

name	Tomm20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67952 MGI:1915202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbm34 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52202 MGI:1098653
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043368 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043368
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 361 ESTs, 15 Proteins pseudo : _no_value

name	Gabarapl2-ps8_1688.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384873
definition	note : GABA(A) receptor-associated protein like 2 pseudogene 8_1688.1 pseudo : _no_value

name	Pard3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93742 MGI:2135608
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	EG628847 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628847 MGI:3644183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	4933403G14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801814 GeneID:74393 MGI:1921643
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933403G14 gene transcript_id : NM_028908.2

name	2310079N02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380891 GeneID:66566 MGI:1913816
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310079N02 gene transcript_id : NM_025636.2

name	E330039K12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126352571 GeneID:270109 MGI:2445010
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E330039K12 gene transcript_id : NM_175561.3

name	BC021891 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119637820 GeneID:234878 MGI:2385307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC021891 transcript_id : NM_145608.2

name	Kcnk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680537 GeneID:16525 MGI:109322
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium channel, subfamily K, member 1 transcript_id : NM_008430.1

name	Slc35f3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126723625 GeneID:210027 MGI:2444426
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 35, member F3 transcript_id : NM_175434.3

name	1810063B05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352059 GeneID:67892 MGI:1915142
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1810063B05 gene transcript_id : NM_174987.3

name	EG619653 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383872 GeneID:619653 MGI:3648068
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 83 ESTs, 7 Proteins product : predicted gene, EG619653, transcript variant 1 transcript_id : XM_883952.2

name	EG619653 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383873 GeneID:619653 MGI:3648068
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 ESTs, 1 Protein product : predicted gene, EG619653, transcript variant 2 transcript_id : XM_895343.2

name	Irf2bp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383874 GeneID:270110 MGI:2443921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 228 ESTs, 9 Proteins product : interferon regulatory factor 2 binding protein 2, transcript variant 1 transcript_id : XM_284454.5

name	Tomm20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13324685 GeneID:67952 MGI:1915202
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocase of outer mitochondrial membrane 20 homolog (yeast) transcript_id : NM_024214.1

name	Rbm34 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42794006 GeneID:52202 MGI:1098653
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding motif protein 34 transcript_id : NM_172762.2

name	Pard3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15809049 GeneID:93742 MGI:2135608
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : par-3 (partitioning defective 3) homolog (C. elegans) transcript_id : NM_033620.1

name	Pard3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365343 GeneID:93742 MGI:2135608
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : par-3 (partitioning defective 3) homolog (C. elegans) transcript_id : NM_001013580.2

name	Pard3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802520 GeneID:93742 MGI:2135608
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : par-3 (partitioning defective 3) homolog (C. elegans) transcript_id : NM_001013581.2

name	EG628847 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82918544 GeneID:628847 MGI:3644183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : predicted gene, EG628847 transcript_id : XM_895111.1

name	4933403G14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859726 CCDS:CCDS22780.1 GeneID:74393 MGI:1921643
definition	codon_start : 1 product : hypothetical protein LOC74393 protein_id : NP_083184.1

name	2310079N02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385098 CCDS:CCDS22781.1 GeneID:66566 MGI:1913816
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC66566 protein_id : NP_079912.1

name	E330039K12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126352572 GeneID:270109 MGI:2445010
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; pecanex-like 2 product : pecanex-like 2 isoform 2 protein_id : NP_780770.2

name	BC021891 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119637821 GeneID:234878 MGI:2385307
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : mixed lineage kinase 4 product : cDNA sequence BC021891 protein_id : NP_663583.2

name	Kcnk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680538 CCDS:CCDS22783.1 GeneID:16525 MGI:109322
definition	GO_component : GO:0005768 - endosome [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA] [Evidence IDA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IC]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : potassium channel, subfamily K, member 1 protein_id : NP_032456.1

name	Slc35f3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126723626 GeneID:210027 MGI:2444426
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : solute carrier family 35, member F3 protein_id : NP_780643.2

name	1810063B05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424683 GeneID:67892 MGI:1915142
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0004129 - cytochrome-c oxidase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : hypothetical protein LOC67892 protein_id : NP_778152.1

name	EG619653 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82919584 GeneID:619653 MGI:3648068
definition	codon_start : 1 product : similar to thymidine kinase 1 isoform 1 protein_id : XP_889045.1

name	EG619653 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82919586 GeneID:619653 MGI:3648068
definition	codon_start : 1 product : similar to thymidine kinase 1 isoform 2 protein_id : XP_900436.1

name	Irf2bp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63579074 GeneID:270110 MGI:2443921
definition	codon_start : 1 product : similar to interferon regulatory factor 2 binding protein 2 isoform 1 protein_id : XP_284454.4

name	Tomm20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13324686 CCDS:CCDS22786.1 GeneID:67952 MGI:1915202
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005740 - mitochondrial envelope [Evidence IDA]; GO:0005742 - mitochondrial outer membrane translocase complex [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0019867 - outer membrane [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : translocase of outer mitochondrial membrane 20 homolog protein_id : NP_077176.1

name	Rbm34 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42794007 CCDS:CCDS22787.1 GeneID:52202 MGI:1098653
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : RNA binding motif protein 34 protein_id : NP_766350.2

name	Pard3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15809050 CCDS:CCDS22788.1 GeneID:93742 MGI:2135608
definition	GO_component : GO:0005912 - adherens junction [Evidence IDA]; GO:0005938 - cell cortex [Evidence IDA]; GO:0005913 - cell-cell adherens junction [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005819 - spindle [Evidence IDA]; GO:0005923 - tight junction [Evidence ISS] [Evidence IEA] [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007409 - axonogenesis [Evidence ISS]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0016337 - cell-cell adhesion [Evidence IC]; GO:0007163 - establishment and/or maintenance of cell polarity [Evidence ISS] [Evidence TAS]; GO:0007205 - protein kinase C activation [Evidence ISS] codon_start : 1 exception : mismatches in translation note : isoform 3 is encoded by transcript variant 3 product : partitioning-defective protein 3 homolog isoform 3 protein_id : NP_296369.1

name	Pard3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61888844 CCDS:CCDS22789.1 GeneID:93742 MGI:2135608
definition	GO_component : GO:0005912 - adherens junction [Evidence IDA]; GO:0005938 - cell cortex [Evidence IDA]; GO:0005913 - cell-cell adherens junction [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005819 - spindle [Evidence IDA]; GO:0005923 - tight junction [Evidence ISS] [Evidence IEA] [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007409 - axonogenesis [Evidence ISS]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0016337 - cell-cell adhesion [Evidence IC]; GO:0007163 - establishment and/or maintenance of cell polarity [Evidence ISS] [Evidence TAS]; GO:0007205 - protein kinase C activation [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : partitioning-defective protein 3 homolog isoform 1 protein_id : NP_001013599.1

name	Pard3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61888842 GeneID:93742 MGI:2135608
definition	GO_component : GO:0005912 - adherens junction [Evidence IDA]; GO:0005938 - cell cortex [Evidence IDA]; GO:0005913 - cell-cell adherens junction [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005819 - spindle [Evidence IDA]; GO:0005923 - tight junction [Evidence ISS] [Evidence IEA] [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007409 - axonogenesis [Evidence ISS]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0016337 - cell-cell adhesion [Evidence IC]; GO:0007163 - establishment and/or maintenance of cell polarity [Evidence ISS] [Evidence TAS]; GO:0007205 - protein kinase C activation [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : partitioning-defective protein 3 homolog isoform 2 protein_id : NP_001013598.1

name	EG628847 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82918545 GeneID:628847 MGI:3644183
definition	codon_start : 1 product : similar to insulinoma protein (rig) protein_id : XP_900204.1

name	LOC668434 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259124 GeneID:668434
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 612 ESTs, 7 Proteins product : similar to ribosomal protein S2 pseudo : _no_value transcript_id : XR_034730.1

name	LOC100043368 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259125 GeneID:100043368
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 361 ESTs, 15 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_034746.1

clone name	MSMg01-392F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429D13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-539B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085O19
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-184I09.T7 (MSMg01no184_i09.b1)	MSMg01-184I09.TJ (MSMg01no184_i09.g1)
ACC	AG376784	AG376785
length	1,334	835
length of high quality (start - end)	355 (30 - 384)	280 (133 - 412)
definition	CHROMAT_FILE: MSMg01no184_i09.b1 PHD_FILE: MSMg01no184_i09.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:58:55 2005	CHROMAT_FILE: MSMg01no184_i09.g1 PHD_FILE: MSMg01no184_i09.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:58:56 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(129,175,430 - 129,175,755)	(129,307,620 - 129,307,896)
sequence	NNGGGCAATGCGCGCTATAGACTCCTATAGGGAGAGGATCCGCGGAATTC TAGTTAGTCCTTGACAAAGAGTTGTCCAAAAGAACAAGATCAGGCCCTTC TCGCTATCTGTCTGTCTGCCTTACATTTGATCATTCCCTTTGAAATGCAT GCCTGCCATGATGTGACATATCCATGAAGGAAGGGGGGCACCTGACATTG GACTTTCAGTTTACGAAACTGTAAGCTATATAAACTTCTTTATGTAATAA AGTACTCAGCTTCTGGTATTTGTTACGACAATGGAAAAAAATGGATTATA GAGCCAGTAGGATCCAATGGGAAAAATATCAGGGAGGGACTTTGTGTGTG TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGATAGAGTTTT TTTTTTCTTCCGCATGATATTTTTGTAATGATTTAATCCAAAACAGTTTT TTTTTTTTTCCCCCCCCCCCCCAGGNAAGAATTTNNAAAAAAAAAAAAAG GGGGGTTTTNTTTTTTTTTTTTTTTTTTTTTTTATAATATATTTTTTATT TTATTTTTTTTATTATTATTTTTTTTTTTTTTAAATTTATTTTTTTTTTT TATATTTAATTTATTATTTTTTAATTATTTTTTTTATTAATTTTTTTTTT ATTTTTTTTTTATTATTTTTTTTAATTTTTAATTTTTTTAAAATATAATT TATTTTTTATTATTTTTTTTTTTAATATAATTTTTTATATTTATTATATA TTATTTTTTTATTTTTTATTATTTTTATTATTTTATATTTATATTTATTT TTTATTATATTAATTATTTTATTTTTAATTTTATTTTTATAATTTTTTTT TATTTATATTTTTATNATTAAATTAATTTTTTATATTTATTTATTTTTTA TTTTTTAATTTATTTTATTTATATTTGTTTTTTTTTTTTATATTTATATA TTATATTTTATTTTTATTAATTTTTTATTANTATTATTTTTTTTTATTAT TTTATTTTTTTTTATTTATAATTTATATTATANTTATTTATTTTATTTAT ATATTTTATTATATTTTATTTTTTTTTTTTATGATATTATATATTATATT AAATATTTTATTTATTTATTTTTTTTTTATATTTTTGATGTATATTTGAT TTTTTTTGTTTTATATTTTTTTTTTTATTTATGTTTTTATTATTTANTAT TTATTTTAATTTATCATAAATTTTTTTATATTTTAAATGTATTTTTTATT ATTATTATTATTATTTTGTTTNTTATATTTAATATTAAAATATTTAATAA TTATATTTAATATATAATATTATTATTTTTTTTT	TTTTTTTTTTTNCNTNNNNNNCTATGACTTCCCTTGTTTGNCCTCTCTCN NNCCGTCTATGATATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGTTTTGTTTCTCTGC TGGGTGGGTTCATGCCTCCATTTCTATCCAGCTTGTGAGGGGTGGTCAGC TTAAGCCAACAGCCCTTTGCAGTACCTAACACGGTGGTGTGTTCAGCATC CAGTTGCCTGCAGGACTAGGTAAGCATGCTACACAGAACCACACACCTGG CTATACAAGACCATCCGTACACACACTGGATGAGGTACTGTTCGTTGGCT TAGGAAATATACACAAAGGCTATGGTGATAGATGGCTCACCAAGTGAAAT GCTTGCTGTTTTTTTTTAACGACCCGCCCTCAATCCCCAGCACTTACATA AAAGTTGGACAGGGTGCTCGAATGACTCTAAGCCTAGTTCTGGGGATAGG GTGGGAGTGTCTGACATGGTAGGATCCCTGACCCTCACCGGTCGATTGAT TCTCACTCTTCCCATATCCTACCCGATTTTTTTTTTACTAATTTCTCCCT TAGCGCTCCGCACATAAATATCCCGTTCTTAAACTATTCCCCAGTGTACG TTTTTGTCCTCCCCCATAAAATGTTACTTTTTGCTTTATACCCATTTTCT TCTACATGTACTATTTACGTGACAAAACACCTAATTTATTTGTTACTGTT TAAATGTGTTATATTTATTATATTTTAATAGTTTTGTCTACCTAGAAGTC GCAGTCTCGGTCCTCTCTCTCTCTCCTCTCTTTTN
quality values	Open. Hide. 0 0 3 6 6 6 8 8 6 8 8 8 8 10 10 8 8 8 8 8 10 13 8 8 8 12 11 12 17 19 30 35 23 29 19 28 28 33 33 34 34 37 37 28 22 29 29 29 43 39 29 24 29 24 19 16 15 15 44 42 50 50 50 50 47 47 47 47 57 43 46 46 47 47 41 41 47 47 46 57 59 57 47 47 47 57 57 57 57 57 57 57 57 57 54 47 57 46 47 47 50 41 41 42 41 42 42 38 36 35 35 50 50 41 47 52 57 57 57 50 50 36 36 14 14 15 32 32 52 43 57 57 57 57 57 57 57 54 54 54 57 57 57 57 59 59 57 52 52 52 57 57 57 57 57 57 57 57 57 57 42 42 35 35 44 42 36 35 35 36 57 57 57 57 52 57 43 43 43 43 43 43 43 31 31 43 43 39 35 39 43 43 52 52 62 62 52 52 62 52 52 52 62 62 62 62 52 62 62 52 52 62 62 52 62 62 62 62 62 62 52 52 52 52 43 43 43 43 52 57 52 52 52 57 59 59 59 57 57 57 57 57 57 45 52 52 57 57 52 52 52 52 52 52 57 57 57 57 52 52 57 57 57 57 57 43 43 35 43 43 59 57 57 57 57 43 42 32 35 35 43 43 39 39 43 43 52 52 52 52 52 57 52 52 52 57 57 44 44 35 35 35 47 47 48 48 43 43 35 32 32 32 32 43 35 35 43 32 42 35 37 42 59 59 59 59 57 57 59 42 33 33 25 32 32 43 43 44 48 57 57 57 57 43 43 43 44 43 43 43 43 43 43 43 43 43 43 43 47 43 48 43 47 43 43 33 39 30 28 28 28 28 31 32 32 39 35 35 28 37 23 23 18 28 21 15 13 13 17 15 8 8 8 10 12 8 8 8 8 9 13 18 11 10 11 11 11 9 10 10 10 8 8 10 9 9 10 11 11 11 12 15 12 13 11 8 8 8 8 8 8 11 11 11 10 10 10 8 8 8 10 10 10 10 10 10 10 10 11 15 20 37 37 39 27 11 8 8 8 8 9 19 21 21 21 21 21 19 10 9 7 7 7 7 3 0 3 6 6 6 6 7 7 3 0 0 3 9 9 19 19 16 14 14 13 11 7 6 6 6 6 8 14 12 10 11 11 10 3 0 3 15 8 8 8 8 7 9 7 7 8 9 9 10 9 8 9 9 9 14 10 16 10 13 8 8 8 8 12 15 10 12 11 10 11 10 11 10 10 8 8 6 6 8 8 10 10 11 12 12 8 8 8 8 8 10 8 8 8 8 8 12 10 10 9 10 10 19 10 8 6 6 8 8 8 8 8 8 6 7 11 8 9 10 13 10 10 10 11 12 13 8 8 8 8 10 10 12 9 7 10 8 9 10 11 12 11 11 9 8 8 8 8 8 8 12 10 8 8 19 10 10 8 10 6 6 8 8 8 8 8 9 21 12 12 8 8 8 10 8 7 7 8 11 13 18 21 24 20 20 14 11 11 7 7 7 8 9 9 9 8 10 8 8 8 8 10 12 12 10 9 9 9 9 16 13 13 13 13 12 11 11 11 11 11 8 8 6 6 10 8 9 9 10 12 8 8 8 8 8 8 6 6 10 8 8 8 10 10 10 9 10 10 10 10 8 12 8 8 8 8 12 12 10 10 8 8 8 13 12 15 10 8 8 8 8 8 8 8 8 10 10 12 12 12 10 13 14 14 10 8 8 8 8 11 10 10 6 6 8 8 10 13 11 11 10 10 10 11 13 12 9 8 8 8 8 6 6 8 8 6 6 8 8 10 9 9 9 12 13 10 8 8 6 8 6 6 8 6 6 11 10 10 8 6 6 6 10 10 6 6 8 8 8 11 6 6 8 8 8 8 9 9 9 9 9 8 9 9 8 8 8 8 10 12 10 11 11 8 8 8 8 8 10 7 9 12 12 14 16 10 9 8 8 3 0 3 8 10 8 10 10 10 10 10 9 10 11 10 10 10 9 9 9 14 13 12 8 9 7 8 8 9 9 10 13 10 10 9 9 9 9 11 11 14 8 8 8 8 8 6 6 6 8 10 8 8 8 10 11 12 10 10 10 12 9 9 9 9 10 12 14 18 25 22 16 10 10 8 8 6 8 8 8 8 8 8 9 9 9 9 8 8 8 8 8 12 12 10 8 8 10 10 9 14 13 10 8 8 8 8 9 9 10 10 8 6 6 8 3 0 3 10 8 8 6 6 8 8 11 11 12 12 11 10 13 8 8 8 8 8 8 9 10 10 12 18 12 17 14 12 10 7 6 6 6 6 6 8 8 8 10 8 8 7 8 8 8 10 8 8 3 0 3 8 6 8 8 6 6 8 8 10 14 11 8 10 8 6 8 7 7 7 8 13 11 12 9 8 8 10 8 6 6 8 10 6 6 8 13 12 10 10 10 10 12 16 11 11 9 9 8 8 6 6 8 13 10 9 17 13 8 8 8 22 8 10 10 10 15 8 8 6 6 7 8 10 7 9 9 7 10 7 8 8 8 8 8 8 10 10 10 12 16 15 12 18 8 6 6 6 8 10 9 12 9 9 9 9 10 9 7 12 8 7 8 6 6 6 6 10 8 15 18 10 10 7 7 8 10 10 10 8 8 7 7 10 10 20 10 13 10 10 9 12 13 13 11 18 12 12 8 6 6 7 7 8 8 6 6 6 6 6 8 8 3 0 3 7 8 8 6 6 10 10 14 6 7 7 6 10 8 6 6 8 8 8 8 8 8 8 8 8 8 8 9 12 12 9 9 12 13 15 9 8 8 8 8 6 6 8 8 9 10 10 8 8 8 8 8 13 11 11 8 8 8 8 8 8 8 8 8 8 8 13 10 7 7 8 8 3 0 3 6 6 8 10 10 12 11 11 7 8 8 8 6 6 8 8 8 8 6 6 6 6 6 6 7 15 8 9 7 7 7 7 10 13 6 6 6 6 8 8 6 6 6 6 6 6 8 6 6 8 12 7 8 8 8 10 11 14 18 15 12	Open. Hide. 23 29 29 29 27 28 24 24 19 17 3 0 3 0 3 0 0 0 0 0 0 3 9 9 6 8 8 10 8 8 8 6 7 8 8 9 9 9 9 3 0 3 8 8 7 6 6 6 3 0 0 0 3 9 9 9 9 9 9 9 8 8 8 7 9 10 14 20 24 24 16 19 23 34 29 31 31 35 35 36 36 34 36 29 34 29 34 28 28 28 28 29 26 26 26 20 20 20 37 40 43 43 43 43 46 42 47 47 47 48 57 59 48 46 42 37 36 30 35 35 35 37 37 43 42 42 37 46 46 38 33 30 28 28 28 42 44 59 57 57 54 54 54 59 59 59 47 47 43 44 43 43 59 43 48 48 57 50 50 57 57 50 50 52 57 57 57 57 52 52 52 57 57 57 52 52 50 43 43 43 57 57 52 57 52 50 50 50 50 35 37 38 57 57 43 43 33 43 31 31 31 44 43 52 52 52 57 43 52 52 52 52 57 57 57 57 59 57 52 52 52 52 52 52 57 57 57 57 57 57 57 57 57 43 43 35 41 41 43 39 39 43 43 43 43 35 57 57 57 43 52 52 57 57 43 43 39 39 43 43 43 52 57 57 57 57 57 52 57 57 43 43 39 41 41 43 43 52 52 57 57 57 57 57 52 52 52 50 43 42 38 38 42 50 50 52 50 44 42 31 31 38 44 50 52 52 52 52 52 43 50 43 52 52 43 43 37 43 43 37 37 37 37 37 50 43 50 43 44 44 46 46 48 48 48 48 48 48 48 48 48 44 46 40 44 44 44 43 43 42 59 42 43 57 46 46 54 54 54 48 48 47 46 43 43 36 36 30 28 23 18 11 11 11 19 21 40 40 57 57 48 48 37 37 23 23 23 41 41 59 59 48 37 36 30 30 32 32 37 37 43 43 41 43 28 32 15 14 9 11 9 13 18 15 17 16 13 12 12 10 10 10 10 16 10 10 10 10 10 10 11 20 20 37 34 47 47 47 47 28 28 14 23 24 34 31 36 36 36 43 43 43 43 43 43 43 43 43 43 43 39 28 22 12 11 11 18 12 12 12 22 12 12 8 8 8 8 10 12 18 16 15 18 28 25 20 20 28 32 39 43 43 35 32 28 28 33 31 28 23 19 18 21 12 17 17 26 15 19 10 10 8 14 11 11 11 11 11 10 11 11 12 11 11 11 15 11 12 10 11 11 11 11 15 11 11 11 11 11 11 11 12 10 8 9 8 8 8 8 8 10 8 8 8 8 8 8 8 8 10 9 8 8 6 6 6 6 10 8 9 9 9 9 8 8 6 6 8 8 9 12 11 12 11 8 8 8 8 9 9 9 9 10 10 13 10 11 11 14 21 11 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 11 11 11 15 16 11 11 8 8 8 8 8 8 8 8 8 8 10 17 15 8 8 10 10 10 8 8 8 8 8 8 9 9 9 10 10 12 8 8 8 8 8 8 8 8 10 11 10 10 10 10 8 8 8 8 8 8 8 8 8 9 9 8 8 8 8 8 8 12 12 12 12 12 12 12 11 11 13 10 10 10 15 15 9 9 8 8 8 10 8 8 8 8 8 6 6 8 8 12 8 8 8 8 10 8 8 8 8 8 8 8 6 6 8 8 8 6 6 8 8 8 8 8 6 6 10 11 10 10 10 10 10 8 8 8 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 9 8 8 8 10 8 13 8 8 8 8 8 8 8 8 8 8 6 8 8 8 8 8 8 8 6 6 6 6 10 12 11 11 9 9 9 8 8 6 6 8 8 10 10 13 13 6 6 8 6 9 9 9 9 10 10 8 8 7 6 8 8 10 9 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no184_i09.b1 MSMg01no184_i09.b1 CHROMAT_FILE:
MSMg01no184_i09.b1 PHD_FILE: MSMg01no184_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:55 2005
         (355 letters)



>mm_chr8_129175215_129175969
          Length = 755

 Score =  630 bits (326), Expect = 0.0
 Identities = 326/326 (100%)
 Strand = Plus / Plus

                                                                       
Query: 16  gaattctagttagtccttgacaaagagttgtccaaaagaacaagatcaggcccttctcgc 75
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gaattctagttagtccttgacaaagagttgtccaaaagaacaagatcaggcccttctcgc 275

                                                                       
Query: 76  tatctgtctgtctgccttacatttgatcattccctttgaaatgcatgcctgccatgatgt 135
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tatctgtctgtctgccttacatttgatcattccctttgaaatgcatgcctgccatgatgt 335

                                                                       
Query: 136 gacatatccatgaaggaaggggggcacctgacattggactttcagtttacgaaactgtaa 195
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gacatatccatgaaggaaggggggcacctgacattggactttcagtttacgaaactgtaa 395

                                                                       
Query: 196 gctatataaacttctttatgtaataaagtactcagcttctggtatttgttacgacaatgg 255
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gctatataaacttctttatgtaataaagtactcagcttctggtatttgttacgacaatgg 455

                                                                       
Query: 256 aaaaaaatggattatagagccagtaggatccaatgggaaaaatatcagggagggactttg 315
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aaaaaaatggattatagagccagtaggatccaatgggaaaaatatcagggagggactttg 515

                                     
Query: 316 tgtgtgtgtgtgtgtgtgtgtgtgtg 341
           ||||||||||||||||||||||||||
Sbjct: 516 tgtgtgtgtgtgtgtgtgtgtgtgtg 541


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 755
Length adjustment: 9
Effective length of query: 346
Effective length of database: 746
Effective search space:   258116
Effective search space used:   258116
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no184_i09.g1 MSMg01no184_i09.g1 CHROMAT_FILE:
MSMg01no184_i09.g1 PHD_FILE: MSMg01no184_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:56 2005
         (280 letters)



>mm_chr8_129307420_129308099
          Length = 680

 Score =  513 bits (265), Expect = e-150
 Identities = 274/277 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   agagttttgtttctctgctgggtgggttcatgcctccatttctatccagcttgtgagggg 60
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 477 agagttttgtttctctgctgggtgggttcaggcctccatttctatccagcttgtgagagg 418

                                                                       
Query: 61  tggtcagcttaagccaacagccctttgcagtacctaacacggtggtgtgttcagcatcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tggtcagcttaagccaacagccctttgcagtacctaacacggtggtgtgttcagcatcca 358

                                                                       
Query: 121 gttgcctgcaggactaggtaagcatgctacacagaaccacacacctggctatacaagacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gttgcctgcaggactaggtaagcatgctacacagaaccacacacctggctatacaagacc 298

                                                                       
Query: 181 atccgtacacacactggatgaggtactgttcgttggcttaggaaatatacacaaaggcta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 atccgtacacacactggatgaggtactgttcgttggcttaggaaatatacacaaaggcta 238

                                                
Query: 241 tggtgatagatggctcaccaagtgaaatgcttgctgt 277
            ||||||||||||||||||||||||||||||||||||
Sbjct: 237 gggtgatagatggctcaccaagtgaaatgcttgctgt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space:   181841
Effective search space used:   181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information