Query= MSMg01no185_f23.b1 MSMg01no185_f23.b1 CHROMAT_FILE:
MSMg01no185_f23.b1 PHD_FILE: MSMg01no185_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:03 2005
(317 letters)
>mm_chr8_27646490_27647210
Length = 721
Score = 563 bits (291), Expect = e-165
Identities = 309/317 (97%), Gaps = 4/317 (1%)
Strand = Plus / Minus
Query: 5 gaattctcttatgggtctcctgtaatttatataccaatacaattttatattactgattag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gaattctcttatgggtctcctgtaatttatataccaatacaattttatattactgattag 462
Query: 65 tgagtggtttggattttcccttccaccttcacatttattcaccctgattctttaatt--- 121
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 461 tgagtggttcagattttcccttccaccttcacatttattcaccctgattctttgattaaa 402
Query: 122 -aaaaaaaaaattcctgaagcttaacttgaggaagtttgcttaacttgcataaactttct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aaaaaaaaaaattcctgaagcttaacttgaggaagtttgcttaacttgcataaactttct 342
Query: 181 gtttgaaatcttgtctcgtggtcatttgcttccatagctgtgcctgtggacagtaaactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gtttgaaatcttgtctcgtggtcatttgcttccatagctgtgcctgtggacagtaaactc 282
Query: 241 cctttactgtggaggggagattaccttattcatgtccccattctcagaatctatgaaatg 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 cctttaccgtggaggggagattaccttattcatgtccccattctcagaatctatgaaatg 222
Query: 301 ttttcacaaagaatact 317
|||||||||||||||||
Sbjct: 221 ttttcacaaagaatact 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 721
Length adjustment: 9
Effective length of query: 308
Effective length of database: 712
Effective search space: 219296
Effective search space used: 219296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_f23.g1 MSMg01no185_f23.g1 CHROMAT_FILE:
MSMg01no185_f23.g1 PHD_FILE: MSMg01no185_f23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:03 2005
(292 letters)
>mm_chr8_27616919_27617610
Length = 692
Score = 526 bits (272), Expect = e-154
Identities = 287/292 (98%)
Strand = Plus / Plus
Query: 1 accctcctcatttgctggttacccactgcattcctgtcctgctcgagcagtgcggtggcc 60
|||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||
Sbjct: 201 accctcctcatttgctggttacccactgcatttctgtcctgctcgagcagttcgatggcc 260
Query: 61 tgtactccaccacactgggctgtcccaacttcagttaggacaacatttccctccatcctt 120
|||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtactccaccatactgggctgtgccaacttcagttaggacaacatttccctccatcctt 320
Query: 121 ggacttttcagagacctgctatgaaacataatggagggttttacacctcctccctctctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggacttttcagagacctgctatgaaacataatggagggttttacacctcctccctctctc 380
Query: 181 acactccttctctccatctgcccctcaccacaggaaagaggagaattaacccaggcagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acactccttctctccatctgcccctcaccacaggaaagaggagaattaacccaggcagta 440
Query: 241 aaagaaggaaagaaggacaggaccctgcataaagatcccccaccccctgtaa 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagaaggaaagaaggacaggaccctgcataaagatcccccaccccctgtaa 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
